Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 NCOR1P3-201ENST00000420479 303 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 MIR4658-201ENST00000584344 65 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 MIR6128-201ENST00000615528 109 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 RNA5SP267-201ENST00000364893 126 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 RNVU1-14-201ENST00000384770 164 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 UBA52P6-201ENST00000399822 382 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 AC074050.1-201ENST00000563247 211 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 FGF7P1-201ENST00000582820 288 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 Z98751.3-201ENST00000604447 521 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 AC022306.2-201ENST00000617563 647 ntBASIC2.51□□□□□ -2.01
NR1H4Q96RI1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NR1H4Q96RI1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 RNA5SP72-201ENST00000364442 117 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 RNU6-784P-201ENST00000384330 106 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 RNA5SP171-201ENST00000391071 115 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC112220.1-201ENST00000434628 355 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 RN7SL504P-201ENST00000494496 287 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC145146.1-201ENST00000496370 254 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC116337.1-201ENST00000509680 687 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC074250.1-201ENST00000511117 192 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 CYP4A27P-201ENST00000567218 190 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC063943.3-201ENST00000615562 356 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC084757.4-201ENST00000616350 526 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC005858.4-201ENST00000623191 700 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AL133216.2-202ENST00000634512 349 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AC233981.2-201ENST00000611524 1614 ntBASIC2.5□□□□□ -2.01
NR1H4Q96RI1 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 RNU6-593P-201ENST00000364716 112 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 Y_RNA.390-201ENST00000383932 102 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 RNU6-306P-201ENST00000384617 107 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 MIR548F5-201ENST00000408421 86 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC012306.1-201ENST00000423267 114 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 CBX3P6-201ENST00000430257 527 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 HMGB1P18-201ENST00000438801 619 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AL353705.4-201ENST00000449661 238 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC083906.5-201ENST00000503722 328 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 MTND5P5-201ENST00000503764 376 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC008885.1-201ENST00000514930 301 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 RN7SKP24-201ENST00000515888 284 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 MIR4273-201ENST00000582824 84 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC005730.3-201ENST00000583067 366 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 MIR6075-201ENST00000620782 95 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 SNORA43.4-201ENST00000629559 138 ntBASIC2.49□□□□□ -2.01
NR1H4Q96RI1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
NR1H4Q96RI1 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AC000403.1-201ENST00000613696 3585 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AC096644.4-201ENST00000563417 2912 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RNU4-15P-201ENST00000362613 141 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 SNORA38.1-201ENST00000364172 131 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RNU6-546P-201ENST00000383991 107 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 MIR548K-201ENST00000408406 116 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RNA5SP494-201ENST00000410653 129 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RPL37P10-201ENST00000412884 288 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 RPS3AP52-201ENST00000435639 297 ntBASIC2.48□□□□□ -2.01
NR1H4Q96RI1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms