Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 MFSD8-236ENST00000641509 4050 ntBASIC4.15□□□□□ -1.74
SYNGAP1Q96PV0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SYNGAP1Q96PV0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.82-201ENST00000363000 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.92-201ENST00000363043 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 SNORA38.1-201ENST00000364172 131 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.235-201ENST00000364412 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.275-201ENST00000364726 110 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.306-201ENST00000365015 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.308-201ENST00000365043 101 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.312-201ENST00000365089 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.322-201ENST00000365151 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.331-201ENST00000365267 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-804P-201ENST00000384286 107 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-1289P-201ENST00000384431 106 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 MIR487A-201ENST00000385009 80 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 RPL19P1-201ENST00000411635 428 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC024067.1-201ENST00000426199 223 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC096638.1-201ENST00000444678 216 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.650-201ENST00000459002 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC091959.1-201ENST00000495857 238 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 RN7SKP49-201ENST00000516675 260 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.777-201ENST00000516982 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 HSPE1P4-201ENST00000550617 308 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 MIR4325-201ENST00000583049 90 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.771-201ENST00000598668 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC006023.1-201ENST00000603944 259 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.789-201ENST00000622480 102 ntBASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SYNGAP1Q96PV0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 BX322639.1-202ENST00000423987 2213 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 MIR544A-201ENST00000384855 91 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 HMGN2P30-201ENST00000423237 256 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 RN7SL93P-201ENST00000463035 293 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AC008155.2-201ENST00000464337 397 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-567P-201ENST00000516746 107 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AC008011.1-201ENST00000545989 227 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 MIR4276-201ENST00000584832 70 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AL138963.2-201ENST00000605137 226 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AC068831.7-201ENST00000616954 363 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 AC007496.3-201ENST00000624987 3443 ntBASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SYNGAP1Q96PV0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.233-201ENST00000364407 101 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 Z98749.2-208ENST00000381646 500 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 MIR10B-201ENST00000385011 110 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 MIR1261-201ENST00000408659 82 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 RPL23AP14-201ENST00000468281 468 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 TRBV12-2-201ENST00000489763 344 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 AK6P2-201ENST00000549020 471 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 AC019159.1-201ENST00000605094 187 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 AC005828.6-201ENST00000606610 232 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNGAP1Q96PV0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 MIR410-201ENST00000362222 80 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 RNU6-961P-201ENST00000363893 105 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 SNORA72.2-201ENST00000365028 127 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 MIR613-201ENST00000385248 95 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 AL390729.2-201ENST00000416137 156 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 COTL1P1-201ENST00000422309 375 ntBASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.12□□□□□ -1.75
SYNGAP1Q96PV0 MTCO1P5-201ENST00000433573 344 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms