Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MTND2P8-201ENST00000450555 1025 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 RNU6-732P-201ENST00000516033 103 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 SNORA25.12-201ENST00000516202 82 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 MTND2P26-201ENST00000528255 1029 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC025678.1-201ENST00000567861 338 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 MIR18A-201ENST00000362310 71 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 RNU6-925P-201ENST00000384629 104 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 MIR593-201ENST00000384856 100 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AC104332.1-201ENST00000440471 797 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 U7.7-201ENST00000459276 60 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 COPS8P3-201ENST00000526024 482 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AP000860.1-201ENST00000605250 559 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 SNORA48.1-201ENST00000390879 135 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 RNU6-360P-201ENST00000390944 104 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.62□□□□□ -2.51
CFAP54Q96N23 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.62□□□□□ -2.51
CFAP54Q96N23 SNORA77B-201ENST00000578179 125 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AC091057.3-201ENST00000602684 733 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AP002826.1-201ENST00000608835 315 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 AL133445.2-201ENST00000611191 527 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 MIR3529-201ENST00000637713 78 ntBASIC-0.62□□□□□ -2.51
CFAP54Q96N23 DSTNP4-201ENST00000399472 474 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MIR548L-201ENST00000408303 86 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AL161935.2-201ENST00000414627 60 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MTCO2P34-201ENST00000421994 607 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 ROCK1P1-201ENST00000573767 549 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC005176.2-201ENST00000596933 147 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AP003465.2-201ENST00000602571 373 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC019131.2-201ENST00000609071 870 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC011939.3-201ENST00000613686 466 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC068057.2-201ENST00000624047 895 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 RAB28P5-201ENST00000427490 651 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC107027.2-201ENST00000512197 115 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 RNA5SP437-201ENST00000517249 129 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 ADAM3B-201ENST00000569937 840 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MIR4263-201ENST00000584745 83 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MTND4P4-201ENST00000439033 1366 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 RNU6-263P-201ENST00000363811 107 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AC006548.1-201ENST00000427470 102 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.63□□□□□ -2.51
CFAP54Q96N23 SUMO2P14-201ENST00000604488 293 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 CR381572.1-201ENST00000625098 102 ntBASIC-0.63□□□□□ -2.51
CFAP54Q96N23 MTND5P16-201ENST00000460269 1703 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 SNORD114-14-201ENST00000362723 75 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 RNA5SP391-201ENST00000363456 119 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
CFAP54Q96N23 SNORD14D-201ENST00000384390 87 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 MTATP6P16-201ENST00000434543 526 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AL714022.1-201ENST00000439897 151 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC116337.2-201ENST00000477662 156 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 SNORD79.1-201ENST00000516069 84 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 RNA5SP291-201ENST00000517222 105 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 NACAP3-201ENST00000552100 481 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC092953.2-201ENST00000608000 699 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC107982.1-201ENST00000507171 1300 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 MIR1302-8-201ENST00000408342 128 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 ELOCP11-201ENST00000436690 332 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 ELOCP16-201ENST00000444494 332 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC006026.2-201ENST00000457376 180 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 RNU7-165P-201ENST00000458864 60 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC138869.1-201ENST00000568623 124 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.64□□□□□ -2.51
CFAP54Q96N23 AC004908.3-201ENST00000610248 625 ntBASIC-0.64□□□□□ -2.51
CFAP54Q96N23 RNU4-46P-201ENST00000410818 138 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.65□□□□□ -2.51
CFAP54Q96N23 PTGES3P1-201ENST00000439531 483 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AC006199.1-201ENST00000548728 219 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AC096586.2-201ENST00000610260 441 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AC010615.1-201ENST00000594254 1764 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 SNORA25B-201ENST00000365507 128 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.65□□□□□ -2.51
CFAP54Q96N23 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.65□□□□□ -2.51
CFAP54Q96N23 MIR6755-201ENST00000619993 66 ntBASIC-0.65□□□□□ -2.51
CFAP54Q96N23 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 USP9YP19-201ENST00000412165 485 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 AL139396.1-201ENST00000421137 167 ntBASIC-0.66□□□□□ -2.51
CFAP54Q96N23 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms