Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AP006587.4-201ENST00000526053 529 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 AC073410.2-201ENST00000603240 332 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 AL138889.2-201ENST00000603883 242 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 BNIP3P31-201ENST00000604515 566 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 AP000654.2-201ENST00000605633 586 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 MIR1248-201ENST00000629190 106 ntBASIC0.6□□□□□ -2.31
ALPK3Q96L96 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
ALPK3Q96L96 RNU6-946P-201ENST00000383878 107 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 MIR1912-201ENST00000410389 80 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 EIF1P1-201ENST00000421436 341 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.59□□□□□ -2.32
ALPK3Q96L96 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.59□□□□□ -2.32
ALPK3Q96L96 AC114982.1-201ENST00000469402 321 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 HMGB1P30-201ENST00000492455 606 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 MTCO3P9-201ENST00000506989 781 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.32
ALPK3Q96L96 AC087894.1-201ENST00000538359 518 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.59□□□□□ -2.32
ALPK3Q96L96 VN1R82P-201ENST00000601481 356 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 DPPA3P3-201ENST00000603842 430 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 AC099785.1-201ENST00000605697 437 ntBASIC0.59□□□□□ -2.32
ALPK3Q96L96 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
ALPK3Q96L96 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.59□□□□□ -2.32
ALPK3Q96L96 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
ALPK3Q96L96 SNORD3E-201ENST00000362899 217 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU6-743P-201ENST00000364151 106 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 SNORA25-201ENST00000384384 134 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU6-843P-201ENST00000384454 104 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 Y_RNA.534-201ENST00000384599 112 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 MIR186-201ENST00000384988 86 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC006366.1-201ENST00000422002 759 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC004854.1-201ENST00000440356 349 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 NDUFB1P2-201ENST00000449477 176 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC010376.1-201ENST00000522101 334 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL021879.1-201ENST00000611756 288 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC023158.2-201ENST00000614876 543 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL627230.5-201ENST00000619807 58 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 SCARNA4-202ENST00000625402 129 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 Y_RNA.132-201ENST00000363421 102 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU6-1176P-201ENST00000390955 107 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL590556.1-201ENST00000423231 483 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC139712.2-201ENST00000424302 339 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 GTF2IP13-201ENST00000438487 386 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 PRPS1P1-201ENST00000445305 876 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC007327.1-201ENST00000447461 264 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC130509.1-201ENST00000464158 433 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU2-10P-201ENST00000516375 211 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU5A-4P-201ENST00000516588 111 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 HMGB1P33-201ENST00000563485 527 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 AC002400.1-201ENST00000569310 726 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.58□□□□□ -2.32
ALPK3Q96L96 AL512427.1-201ENST00000618593 349 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 MIR338-201ENST00000636369 67 ntBASIC0.58□□□□□ -2.32
ALPK3Q96L96 RNU6-72P-201ENST00000384285 79 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.57□□□□□ -2.32
ALPK3Q96L96 C8orf59P1-201ENST00000429930 303 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 RPL23AP30-201ENST00000432419 501 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 AC073614.1-201ENST00000438690 650 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.57□□□□□ -2.32
ALPK3Q96L96 APOOP3-201ENST00000536787 586 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 BNIP3P6-201ENST00000549284 499 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 AP003465.2-201ENST00000602571 373 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 AC018926.1-201ENST00000616335 435 ntBASIC0.57□□□□□ -2.32
ALPK3Q96L96 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
ALPK3Q96L96 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC019070.1-201ENST00000415008 1024 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 MTND2P4-201ENST00000445034 1004 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC011005.2-201ENST00000487324 359 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC113347.3-201ENST00000509113 148 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC005741.1-201ENST00000511094 432 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC109445.1-201ENST00000512356 383 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC008507.2-201ENST00000588402 1176 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 RNU5A-8P-201ENST00000364102 114 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 Y_RNA.390-201ENST00000383932 102 ntBASIC0.56□□□□□ -2.32
ALPK3Q96L96 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.56□□□□□ -2.32
ALPK3Q96L96 FCF1P10-201ENST00000407590 479 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms