Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 AC025281.1-201ENST00000567026 265 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 AC016925.2-201ENST00000605108 242 ntBASIC2.98□□□□□ -1.93
VPS50Q96JG6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS50Q96JG6 MTND4P1-201ENST00000457501 1466 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS50Q96JG6 SNORA33.2-201ENST00000365413 134 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU6-622P-201ENST00000384272 103 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU6-784P-201ENST00000384330 106 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 MIR128-1-201ENST00000384921 82 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 MIR767-201ENST00000390228 109 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 SNORA48.2-201ENST00000390926 124 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 UBA52P6-201ENST00000399822 382 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 EIF4EP2-201ENST00000422816 654 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC008267.5-201ENST00000424928 265 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 RPL30P12-201ENST00000474666 353 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RPS27P26-201ENST00000494583 239 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC114801.2-201ENST00000503825 781 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU6-307P-201ENST00000516743 106 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU6-826P-201ENST00000516827 104 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 SNORD19.2-201ENST00000516978 73 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 RNU6-264P-201ENST00000517134 104 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AL137843.1-201ENST00000605078 385 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC093732.2-201ENST00000607950 274 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC024581.2-201ENST00000619986 252 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 SCARNA15.3-201ENST00000626315 122 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 SCARNA4.1-201ENST00000628597 123 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 AC009541.1-201ENST00000438279 2662 ntBASIC2.97□□□□□ -1.93
VPS50Q96JG6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VPS50Q96JG6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
VPS50Q96JG6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.93
VPS50Q96JG6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VPS50Q96JG6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 Y_RNA.202-201ENST00000364083 110 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 RNY3P11-201ENST00000364153 102 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 SNORA71.1-201ENST00000364523 117 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 Y_RNA.252-201ENST00000364556 101 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 RNY1P14-201ENST00000384426 108 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 MCFD2P1-201ENST00000417812 300 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 MTND4P19-201ENST00000446659 478 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 RPL17P19-201ENST00000489069 552 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AC006445.1-201ENST00000491925 405 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AP000889.1-201ENST00000530968 660 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 SUB1P3-201ENST00000564581 315 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AC060766.3-201ENST00000591442 263 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AL360085.1-201ENST00000604713 532 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 AC006157.1-201ENST00000611750 366 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 AC091925.1-201ENST00000623204 462 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 MIR3529-201ENST00000637713 78 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.96□□□□□ -1.94
VPS50Q96JG6 ZNF299P-201ENST00000406845 1804 ntBASIC2.96□□□□□ -1.94
VPS50Q96JG6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VPS50Q96JG6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS50Q96JG6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS50Q96JG6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS50Q96JG6 RNU6-595P-201ENST00000363944 107 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 MIR606-201ENST00000384851 96 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 U3.26-201ENST00000391236 204 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS50Q96JG6 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC124916.1-201ENST00000444020 547 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 SEM1P1-201ENST00000506694 209 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 RNU6-1137P-201ENST00000517073 99 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC022080.3-201ENST00000544433 482 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.95□□□□□ -1.94
VPS50Q96JG6 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AC090897.2-201ENST00000581715 130 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 AL391813.1-201ENST00000603098 260 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
VPS50Q96JG6 SNORA43.4-201ENST00000629559 138 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms