Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNORD116-5-201ENST00000384462 95 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 Y_RNA.500-201ENST00000384466 111 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 MIR597-201ENST00000384968 97 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNA5SP219-201ENST00000390940 113 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNU6-1158P-201ENST00000391167 107 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 AL030996.1-201ENST00000411430 235 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 AP000275.1-201ENST00000411943 390 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 FTH1P25-201ENST00000447665 469 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNU6-1037P-201ENST00000459571 107 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 SNORA14.1-201ENST00000516113 141 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNU6-189P-201ENST00000516120 101 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 SNORA31.16-201ENST00000516773 139 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 CYP4A27P-201ENST00000567218 190 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 AC025754.2-201ENST00000606491 432 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 HULC.1-201ENST00000612720 240 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.97□□□□□ -2.09
PTP4A1Q93096 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNA5SP289-201ENST00000362332 137 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 RNU4-82P-201ENST00000362443 140 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 MIR221-201ENST00000385135 110 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC068050.1-201ENST00000394891 380 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.96□□□□□ -2.1
PTP4A1Q93096 MTCO2P16-201ENST00000436962 677 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 HMGN2P18-201ENST00000450680 270 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC112492.4-201ENST00000456549 352 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 RNU6-261P-201ENST00000459506 102 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 UBE2DNL-203ENST00000474922 222 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC104564.1-201ENST00000493028 407 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC008628.2-201ENST00000502605 298 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC079140.3-201ENST00000511111 550 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC091133.4-201ENST00000511142 308 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 RNA5SP281-201ENST00000516504 135 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC087854.1-201ENST00000519706 414 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.96□□□□□ -2.1
PTP4A1Q93096 MIR5583-1-201ENST00000580941 59 ntBASIC1.96□□□□□ -2.1
PTP4A1Q93096 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
PTP4A1Q93096 MIR449A-201ENST00000362113 91 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 RNU6-1322P-201ENST00000364309 107 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 RNA5SP201-201ENST00000410316 124 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 RNU4-53P-201ENST00000410828 140 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 MTCO3P41-201ENST00000414801 328 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 ARL5AP1-201ENST00000418991 388 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AL606489.2-201ENST00000433886 234 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC114801.2-201ENST00000503825 781 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 MIR449C-201ENST00000516047 92 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 SNORA40.12-201ENST00000516329 111 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 RNA5SP200-201ENST00000516360 103 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 SNORA44.1-201ENST00000517031 108 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 EIF4A1P12-201ENST00000551910 141 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC009063.1-201ENST00000563342 702 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 VN1R80P-201ENST00000597126 338 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC064807.4-201ENST00000607201 407 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC017083.3-201ENST00000609955 700 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 AC139792.3-201ENST00000623525 224 ntBASIC1.95□□□□□ -2.1
PTP4A1Q93096 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PTP4A1Q93096 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PTP4A1Q93096 Y_RNA.332-201ENST00000365271 113 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 Y_RNA.359-201ENST00000365498 102 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 EIF1AXP1-201ENST00000419267 435 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC123900.1-201ENST00000420390 96 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 TPTE2P5-203ENST00000458118 728 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 RNU1-131P-201ENST00000458943 161 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 MTCO3P38-201ENST00000468910 766 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC091885.1-201ENST00000506658 268 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC010486.1-201ENST00000511793 424 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 RNA5SP401-201ENST00000515920 127 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 MTND2P38-201ENST00000522536 667 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC016256.1-201ENST00000547971 354 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 SNRPGP18-201ENST00000553000 214 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.94□□□□□ -2.1
PTP4A1Q93096 MIR3611-201ENST00000584484 83 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC005786.1-201ENST00000588553 154 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 AC116312.1-201ENST00000606841 314 ntBASIC1.94□□□□□ -2.1
PTP4A1Q93096 PCGEM1.1-201ENST00000613431 131 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms