Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC116337.1-201ENST00000509680 687 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.01□□□□□ -1.93
ATP2A3Q93084 RN7SKP295-201ENST00000517264 153 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.01□□□□□ -1.93
ATP2A3Q93084 MIR3117-201ENST00000584034 78 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC024153.1-201ENST00000603103 365 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC009229.3-201ENST00000608056 282 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC007485.1-201ENST00000616755 206 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 AC138627.2-201ENST00000624202 601 ntBASIC3.01□□□□□ -1.93
ATP2A3Q93084 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATP2A3Q93084 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
ATP2A3Q93084 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ATP2A3Q93084 MTND5P10-201ENST00000603719 1809 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 CDC27P3-201ENST00000635418 1910 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RNU6-78P-201ENST00000362897 107 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 Y_RNA.144-201ENST00000363521 113 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RNU6-461P-201ENST00000364195 107 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ATP2A3Q93084 RNU6-1040P-201ENST00000383974 107 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 Y_RNA.459-201ENST00000384251 102 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RNU6-933P-201ENST00000384424 107 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RNU6-1105P-201ENST00000384774 107 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 Y_RNA.594-201ENST00000410373 140 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3□□□□□ -1.93
ATP2A3Q93084 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3□□□□□ -1.93
ATP2A3Q93084 AL358176.2-201ENST00000425769 204 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3□□□□□ -1.93
ATP2A3Q93084 AC087499.2-201ENST00000432861 149 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3□□□□□ -1.93
ATP2A3Q93084 PCMTD1P1-201ENST00000455560 355 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RNU7-187P-201ENST00000458985 68 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AK3P2-201ENST00000507976 429 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 RN7SKP40-201ENST00000517211 242 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3□□□□□ -1.93
ATP2A3Q93084 AC010186.2-204ENST00000537668 439 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 HSPE1P20-201ENST00000538133 289 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AC006199.1-201ENST00000548728 219 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3□□□□□ -1.93
ATP2A3Q93084 MIR4680-201ENST00000580906 66 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3□□□□□ -1.93
ATP2A3Q93084 AC018462.2-201ENST00000605375 395 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AL121655.1-201ENST00000605811 308 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AL161423.1-201ENST00000613700 262 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3□□□□□ -1.93
ATP2A3Q93084 U4.7-201ENST00000638126 106 ntBASIC3□□□□□ -1.93
ATP2A3Q93084 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATP2A3Q93084 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
ATP2A3Q93084 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 RNU1-100P-201ENST00000365255 165 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 RNU6-639P-201ENST00000384074 107 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 MIR568-201ENST00000385036 95 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AL513475.1-201ENST00000406602 315 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 RNA5SP184-201ENST00000411071 108 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AL030996.1-201ENST00000411430 235 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AL117339.3-201ENST00000418733 162 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 USP9YP30-201ENST00000430729 455 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AL161651.1-201ENST00000440882 223 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AC124916.1-201ENST00000444020 547 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AC107626.1-201ENST00000471084 183 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 GZMAP1-201ENST00000503054 631 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 RNU5F-8P-201ENST00000515941 111 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 RNA5SP384-201ENST00000516615 116 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 SNORA43.2-201ENST00000516652 128 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 AC103996.1-201ENST00000555468 102 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 MIR5690-201ENST00000583739 73 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 AC011890.2-201ENST00000613393 294 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
ATP2A3Q93084 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.99□□□□□ -1.93
ATP2A3Q93084 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATP2A3Q93084 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ATP2A3Q93084 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RNU6-1309P-201ENST00000363305 108 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 Y_RNA.151-201ENST00000363566 112 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 SNORA18.3-201ENST00000384122 132 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 Y_RNA.463-201ENST00000384271 102 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RNU6-790P-201ENST00000384479 105 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 MIR517A-201ENST00000385001 87 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 MCFD2P1-201ENST00000417812 300 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 AC243428.1-201ENST00000421099 264 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 AC018865.2-201ENST00000423631 129 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
ATP2A3Q93084 U8.21-201ENST00000459536 136 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RN7SL429P-201ENST00000479090 223 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RN7SL489P-201ENST00000486185 223 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RN7SL327P-201ENST00000488659 223 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RPL23AP49-201ENST00000492925 468 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 AC097473.1-201ENST00000508142 408 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 AC116655.1-201ENST00000508324 901 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 RN7SKP132-201ENST00000516001 208 ntBASIC2.98□□□□□ -1.93
ATP2A3Q93084 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms