Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 RNU4-82P-201ENST00000362443 140 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 RNA5SP432-201ENST00000362480 116 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 Y_RNA.200-201ENST00000364018 102 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 SNORA7.2-201ENST00000364446 145 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 RNU6-926P-201ENST00000384075 107 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 RNU6-843P-201ENST00000384454 104 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 MIR493-201ENST00000385254 89 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AL139281.1-201ENST00000422120 335 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AC092047.1-201ENST00000424997 240 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AL138752.1-201ENST00000452964 351 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AC117440.1-201ENST00000474107 571 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 RNU6-703P-201ENST00000516946 107 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AP004607.1-201ENST00000524456 203 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 MIR6715A-201ENST00000615929 79 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 SCARNA4-201ENST00000629045 128 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.93□□□□□ -1.78
LINC00116Q8NCU8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 Y_RNA.180-201ENST00000363867 113 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RNU6-898P-201ENST00000365627 104 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 Z98749.2-208ENST00000381646 500 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 SNORA18.3-201ENST00000384122 132 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RNU6-17P-201ENST00000384245 107 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RNU6-18P-201ENST00000384527 107 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 MIR32-201ENST00000384965 70 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AC022018.1-201ENST00000430685 241 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AL512844.2-201ENST00000433990 593 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 CST9LP2-201ENST00000437612 320 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AC016700.2-201ENST00000446011 156 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AC020895.1-201ENST00000595362 272 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 RPL23AP88-201ENST00000605759 454 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 AC091903.1-201ENST00000624322 454 ntBASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.92□□□□□ -1.78
LINC00116Q8NCU8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RNU1-35P-201ENST00000362782 153 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RNU6-879P-201ENST00000364328 108 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 MIR1298-201ENST00000408783 112 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 AL139156.1-201ENST00000412785 841 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 AL109933.2-201ENST00000452651 260 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 MED28P2-201ENST00000475771 317 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RPS4XP22-201ENST00000480755 780 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RPL30P1-201ENST00000488676 339 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RPL7P47-201ENST00000497299 556 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 SERF1AP1-201ENST00000514575 187 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RNU6-496P-201ENST00000516145 99 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 AL360157.1-201ENST00000565962 87 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 RMST_6.1-201ENST00000611980 203 ntBASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LINC00116Q8NCU8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AC073325.2-201ENST00000339545 159 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 RNU6-1286P-201ENST00000383871 107 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 RNU6-102P-201ENST00000384485 104 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AL445305.1-201ENST00000432577 575 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AL031659.1-201ENST00000447075 539 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 RPS4XP13-201ENST00000483219 789 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AC090281.1-201ENST00000523019 276 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AC007390.2-201ENST00000606229 3803 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 FTX_3.1-201ENST00000610451 147 ntBASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LINC00116Q8NCU8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 Y_RNA.83-201ENST00000363005 113 ntBASIC3.89□□□□□ -1.79
LINC00116Q8NCU8 MIR153-2-201ENST00000385225 87 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms