Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 AC091812.1-201ENST00000432235 1948 ntBASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CLIP4Q8N3C7 ADAM3A-203ENST00000461344 2157 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.39-201ENST00000362620 98 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 RNU6-595P-201ENST00000363944 107 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 SNORD116-20-201ENST00000384529 92 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AL138885.1-201ENST00000405921 675 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 FTH1P15-201ENST00000406984 280 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC023141.4-201ENST00000412031 328 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 MTCYBP10-201ENST00000424905 650 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AL353752.1-201ENST00000454946 260 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 GNAI2P1-201ENST00000541815 315 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC012493.2-201ENST00000595083 291 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC009318.2-201ENST00000610917 651 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AL078596.1-201ENST00000624856 447 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC241585.2-209ENST00000638217 143 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 AC110491.1-201ENST00000562191 2010 ntBASIC2.64□□□□□ -1.99
CLIP4Q8N3C7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 MIR422A-201ENST00000362286 90 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 CD24P4-201ENST00000382840 243 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.389-201ENST00000383924 113 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 RNU6-784P-201ENST00000384330 106 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 RNU6-1105P-201ENST00000384774 107 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AP000275.1-201ENST00000411943 390 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC074117.2-201ENST00000417130 397 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AL358176.2-201ENST00000425769 204 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC096644.2-201ENST00000429278 159 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC243964.1-201ENST00000441814 261 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 MRPL42P6-201ENST00000486397 371 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 SCARNA13-201ENST00000516672 275 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 CR383656.8-201ENST00000549046 145 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 HSBP1P1-201ENST00000555205 166 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AP000942.4-201ENST00000604811 241 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 SNORD58B-201ENST00000607313 66 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC096577.2-201ENST00000611455 153 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AL606534.2-204ENST00000635008 178 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
CLIP4Q8N3C7 ZNF72P-201ENST00000425869 1908 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC091564.4-201ENST00000533934 2194 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 SNORD56.1-201ENST00000362913 68 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RNU6-1309P-201ENST00000363305 108 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.133-201ENST00000363428 110 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RNY3P11-201ENST00000364153 102 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RNU6-700P-201ENST00000391043 107 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC092423.1-201ENST00000430165 186 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC022018.1-201ENST00000430685 241 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RPS15AP5-201ENST00000436276 388 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC079354.2-201ENST00000453523 154 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 RNU7-4P-201ENST00000516961 62 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC004584.2-201ENST00000570407 410 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR5701-3-201ENST00000578890 82 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR5701-1-201ENST00000585138 82 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR1244-1-201ENST00000612829 85 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR5701-2-201ENST00000615634 82 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR8057-201ENST00000620957 69 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms