Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 HSPE1P26-201ENST00000405341 275 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 BMS1P22-201ENST00000414726 313 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC009237.8-201ENST00000445492 379 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 HMGN2P16-201ENST00000456802 261 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC098869.1-201ENST00000481627 292 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AL160314.1-201ENST00000490836 438 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.5□□□□□ -1.85
SYNE4Q8N205 Y_RNA.673-201ENST00000516306 88 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC109329.1-201ENST00000518744 317 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC004584.2-201ENST00000570407 410 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 MIR5701-3-201ENST00000578890 82 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 MIR5701-1-201ENST00000585138 82 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC004805.2-201ENST00000605382 482 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 MIR5701-2-201ENST00000615634 82 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 U7.8-201ENST00000619968 63 ntBASIC3.5□□□□□ -1.85
SYNE4Q8N205 AC007785.2-201ENST00000598627 1916 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AP000560.1-201ENST00000624150 1937 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYNE4Q8N205 Y_RNA.276-201ENST00000364732 109 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 RNU6-827P-201ENST00000365553 106 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 RNU6-209P-201ENST00000384118 107 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 MIR325-201ENST00000385260 98 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 RNU6-1025P-201ENST00000410629 104 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AC245291.1-201ENST00000419501 328 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AC092423.1-201ENST00000430165 186 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 FCF1P4-201ENST00000448326 183 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 MTND4LP30-201ENST00000454092 297 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE4Q8N205 ANXA2P1-201ENST00000505539 926 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 ACA59.1-201ENST00000515966 143 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 RNA5SP290-201ENST00000517133 127 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.49□□□□□ -1.85
SYNE4Q8N205 CASP1P1-201ENST00000526345 212 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 TRAV28-201ENST00000557548 323 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 MIR1273C-201ENST00000578669 77 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AC009314.1-201ENST00000603871 304 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AC010900.2-201ENST00000604508 210 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AL110115.1-201ENST00000614396 364 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AL159153.1-201ENST00000619688 317 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 AC092628.2-201ENST00000622492 339 ntBASIC3.49□□□□□ -1.85
SYNE4Q8N205 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNE4Q8N205 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.49□□□□□ -1.85
SYNE4Q8N205 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE4Q8N205 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE4Q8N205 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SYNE4Q8N205 RNU1-35P-201ENST00000362782 153 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RNA5SP68-201ENST00000363885 119 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RNU6-770P-201ENST00000363929 105 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 Y_RNA.245-201ENST00000364493 95 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 Y_RNA.551-201ENST00000384661 102 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 Y_RNA.552-201ENST00000384665 112 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RNU6-1197P-201ENST00000391183 107 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE4Q8N205 MIR1302-6-201ENST00000408466 90 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 SNORD56-201ENST00000413522 71 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 AL590383.1-201ENST00000428602 75 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE4Q8N205 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE4Q8N205 LINC01399-202ENST00000458450 244 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 RPS15AP34-201ENST00000487776 387 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 AC093852.1-201ENST00000503587 266 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 AC006445.2-201ENST00000510061 472 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 ATP5F1P5-201ENST00000526403 760 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 AC103996.1-201ENST00000555468 102 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.48□□□□□ -1.85
SYNE4Q8N205 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE4Q8N205 VN1R91P-201ENST00000594377 169 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 AC004832.5-201ENST00000608677 401 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.48□□□□□ -1.85
SYNE4Q8N205 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYNE4Q8N205 AF127577.6-201ENST00000623352 2191 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 RPL9P7-201ENST00000330965 580 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 Y_RNA.33-201ENST00000362591 102 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 RNU6-859P-201ENST00000362728 107 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 SNORD14B-201ENST00000364533 90 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 MIR521-1-201ENST00000384902 87 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 AL513043.1-201ENST00000439124 535 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 Z82210.1-201ENST00000440037 231 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 AL590664.1-201ENST00000448065 339 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 RPL21P104-201ENST00000464143 478 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 RPL9P9-202ENST00000466501 579 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 AC139453.3-201ENST00000493276 369 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 RNU6-1023P-201ENST00000516137 106 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 AC012433.1-201ENST00000588916 398 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 SDR42E1P4-201ENST00000620894 481 ntBASIC3.47□□□□□ -1.85
SYNE4Q8N205 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SYNE4Q8N205 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SYNE4Q8N205 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SYNE4Q8N205 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms