Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBE3DQ7Z6J8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-449P-201ENST00000383914 107 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 RNU5E-9P-201ENST00000411164 104 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC245291.1-201ENST00000419501 328 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 PTGES3P4-201ENST00000426243 356 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL117339.2-201ENST00000430475 180 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL441985.1-201ENST00000457727 251 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC107626.1-201ENST00000471084 183 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 RPS4XP13-201ENST00000483219 789 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 RPL32P34-201ENST00000486380 400 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 RPS26P15-201ENST00000488067 348 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC006445.2-201ENST00000510061 472 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 SUMO2P18-201ENST00000518873 252 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL162713.1-201ENST00000604480 262 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL008718.3-201ENST00000610217 321 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UBE3DQ7Z6J8 SPRR2C-201ENST00000290702 219 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 Y_RNA.238-201ENST00000364441 102 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 SNORD116-18-201ENST00000383961 92 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 Y_RNA.400-201ENST00000383963 111 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AC096649.2-201ENST00000416186 393 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 BTF3P11-201ENST00000426582 477 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RPL23AP82-202ENST00000427528 469 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AC005300.1-201ENST00000428401 373 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AC091390.1-201ENST00000433904 331 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AL162151.2-201ENST00000448875 158 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 snoU13.14-201ENST00000459372 104 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RPS27AP9-201ENST00000477681 438 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 HMGB3P3-201ENST00000510526 400 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-966P-201ENST00000516479 104 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 RNU2-12P-201ENST00000517216 168 ntBASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UBE3DQ7Z6J8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-1010P-201ENST00000362757 107 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNA5SP283-201ENST00000365604 119 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNU2-51P-201ENST00000410708 197 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AC004975.1-201ENST00000428733 208 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNA5SP310-201ENST00000459084 116 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AC026726.1-201ENST00000512859 601 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-479P-201ENST00000516348 105 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-62P-201ENST00000516526 102 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-344P-201ENST00000516635 111 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 MIR3145-201ENST00000580727 82 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 DEFB117-201ENST00000602356 141 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AC024220.1-201ENST00000603675 484 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 AL034555.1-201ENST00000604816 211 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 MIR6076-201ENST00000617521 113 ntBASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.73□□□□□ -1.81
UBE3DQ7Z6J8 LINC02471-203ENST00000641941 4752 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 RNU4-84P-201ENST00000364200 139 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 Y_RNA.357-201ENST00000365487 109 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 RNU6-19P-201ENST00000384718 107 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 CBX3P9-201ENST00000402326 552 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 RNU5F-2P-201ENST00000516066 82 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 RNU2-58P-201ENST00000516403 183 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 AC007224.1-201ENST00000564410 144 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 AL591424.2-201ENST00000617023 128 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
UBE3DQ7Z6J8 MIR6500-201ENST00000622700 86 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms