Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-325P-201ENST00000411132 105 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC096649.2-201ENST00000416186 393 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AL365496.1-201ENST00000426885 215 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 U8.21-201ENST00000459536 136 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC107222.1-201ENST00000510899 637 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-559P-201ENST00000516151 98 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 CR383656.8-201ENST00000549046 145 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 MIR5007-201ENST00000583098 95 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC097372.5-201ENST00000623665 376 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 AC138627.2-201ENST00000624202 601 ntBASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRT28Q7Z3Y7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 SNORD56.1-201ENST00000362913 68 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 RNY3P1-201ENST00000365085 102 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 RNY3-201ENST00000365484 102 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-306P-201ENST00000384617 107 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MIR147B-201ENST00000390185 80 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MIR1287-201ENST00000408492 90 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MED28P2-201ENST00000475771 317 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 HSPE1P18-201ENST00000517602 280 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC091152.3-201ENST00000604227 325 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC124303.1-201ENST00000605703 360 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC009318.2-201ENST00000610917 651 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AL161423.1-201ENST00000613700 262 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC090617.7-201ENST00000623952 126 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MIR3529-201ENST00000637713 78 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 AC073544.1-201ENST00000600110 1595 ntBASIC3.17□□□□□ -1.9
KRT28Q7Z3Y7 MTND4P23-201ENST00000447723 1363 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-336P-201ENST00000364891 107 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 RNU6-1297P-201ENST00000384415 104 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 Y_RNA.535-201ENST00000384612 99 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 MIR517A-201ENST00000385001 87 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC104332.2-201ENST00000429959 156 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC236972.2-201ENST00000434979 310 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC018634.1-201ENST00000437554 401 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 RPL23AP70-201ENST00000483361 460 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 GZMAP1-201ENST00000503054 631 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 IMMP1LP2-201ENST00000552954 492 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 FRG2DP-202ENST00000566967 323 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC098657.3-201ENST00000620434 263 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AC008669.1-201ENST00000565823 2178 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRT28Q7Z3Y7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.15□□□□□ -1.9
KRT28Q7Z3Y7 RNU4-79P-201ENST00000362764 141 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 Y_RNA.118-201ENST00000363300 101 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-105P-201ENST00000363909 104 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-593P-201ENST00000364716 112 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 SNORA41-201ENST00000384675 132 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 RNU4-14P-201ENST00000410858 122 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-370P-201ENST00000411008 104 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC074117.2-201ENST00000417130 397 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 Z82205.1-201ENST00000428456 297 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 SMURF2P1-201ENST00000514992 481 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 RNU6-1016P-201ENST00000516689 94 ntBASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.15□□□□□ -1.91
KRT28Q7Z3Y7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms