Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 AC008555.8-201ENST00000623602 2168 ntBASIC2.32□□□□□ -2.04
NUP54Q7Z3B4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 CBX3P9-201ENST00000402326 552 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AL162578.1-201ENST00000406202 378 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 GPM6BP3-201ENST00000442797 145 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 RPL30P1-201ENST00000488676 339 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC069439.1-201ENST00000494739 167 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 RNU6-358P-201ENST00000516564 75 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC104576.1-201ENST00000524225 88 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC026371.1-201ENST00000551867 419 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC060780.3-201ENST00000589464 80 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AP001836.1-201ENST00000604675 523 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC104237.2-201ENST00000612456 443 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 MIR6852-201ENST00000621699 66 ntBASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP54Q7Z3B4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 SNORA25.6-201ENST00000364121 118 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 RNU6-43P-201ENST00000384302 107 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 MTCO3P18-201ENST00000440206 761 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 RNU6-256P-201ENST00000516747 97 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AP000889.2-201ENST00000532684 490 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 TRAV32-201ENST00000553993 340 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 SCOCP1-201ENST00000554676 349 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC018638.8-201ENST00000588755 281 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 MTND4P23-201ENST00000447723 1363 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AP000560.1-201ENST00000624150 1937 ntBASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP54Q7Z3B4 AC016717.2-201ENST00000609089 5141 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1252P-201ENST00000363054 104 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 SNORD32A-201ENST00000364805 84 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 SNORA25B-201ENST00000365507 128 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 RNU6-1148P-201ENST00000410992 104 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AP000275.1-201ENST00000411943 390 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 RPL23AP95-201ENST00000426806 265 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 MTND1P2-201ENST00000430604 821 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AL139415.2-201ENST00000431968 163 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 U8.21-201ENST00000459536 136 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 RNU6-586P-201ENST00000517265 104 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC093249.1-201ENST00000567049 203 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AL356575.1-201ENST00000603008 283 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC068944.2-201ENST00000610373 403 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AL138726.1-201ENST00000614873 333 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AL136221.1-201ENST00000621449 509 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC009033.1-201ENST00000624279 431 ntBASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP54Q7Z3B4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 Y_RNA.135-201ENST00000363439 95 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 RN7SKP61-201ENST00000410642 295 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AC078809.1-201ENST00000427601 140 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AL645568.3-201ENST00000433683 316 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 USP9YP8-201ENST00000441913 500 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 RPL32P28-201ENST00000443577 397 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AL031659.1-201ENST00000447075 539 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AMD1P1-201ENST00000457220 922 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AC022447.4-201ENST00000504053 364 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AC096745.1-201ENST00000509945 370 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 RNU6-612P-201ENST00000516909 102 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 RN7SKP256-201ENST00000517201 314 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AC034114.1-201ENST00000520293 285 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 IMMP1LP2-201ENST00000552954 492 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 MIR3672-201ENST00000584290 82 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms