Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.54□□□□□ -2
SHFQ7M4L6 RPL36AP48-201ENST00000485521 314 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RN7SL504P-201ENST00000494496 287 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.54□□□□□ -2
SHFQ7M4L6 AP000889.1-201ENST00000530968 660 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.54□□□□□ -2
SHFQ7M4L6 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.54□□□□□ -2
SHFQ7M4L6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 CYP2C61P-201ENST00000604072 290 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AC007792.1-201ENST00000623023 402 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AL450472.1-202ENST00000637286 180 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHFQ7M4L6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
SHFQ7M4L6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHFQ7M4L6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.53□□□□□ -2
SHFQ7M4L6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHFQ7M4L6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 Y_RNA.132-201ENST00000363421 102 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 RNU6-595P-201ENST00000363944 107 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 RNU6-1227P-201ENST00000383981 107 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 SNORA36A-201ENST00000384221 132 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 Y_RNA.463-201ENST00000384271 102 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 RNA5SP492-201ENST00000411330 114 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 CYCSP48-201ENST00000417124 323 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 AC244670.1-201ENST00000436879 112 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 AC090525.1-201ENST00000479116 478 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 RPL30P1-201ENST00000488676 339 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC104564.1-201ENST00000493028 407 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC083906.5-201ENST00000503722 328 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC074250.1-201ENST00000511117 192 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.53□□□□□ -2
SHFQ7M4L6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 HSPE1P20-201ENST00000538133 289 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC020661.2-201ENST00000560114 134 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.53□□□□□ -2
SHFQ7M4L6 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 uc_338.22-201ENST00000622722 187 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 AC134503.1-201ENST00000633048 54 ntBASIC2.53□□□□□ -2
SHFQ7M4L6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHFQ7M4L6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHFQ7M4L6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHFQ7M4L6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.53□□□□□ -2
SHFQ7M4L6 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 Y_RNA.5-201ENST00000362334 102 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNU6-212P-201ENST00000362642 104 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNY1P16-201ENST00000363063 111 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 U3.13-201ENST00000364804 214 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNVU1-14-201ENST00000384770 164 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR1302-11-201ENST00000408051 138 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR1302-9-201ENST00000408365 138 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR1302-10-201ENST00000408734 138 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 YME1L1P1-201ENST00000429435 297 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AL513124.1-201ENST00000450410 614 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 snoU13.14-201ENST00000459372 104 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC068781.1-201ENST00000488231 618 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 RPL17P19-201ENST00000489069 552 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC016632.1-201ENST00000503994 196 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC091826.1-201ENST00000514065 313 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC109329.1-201ENST00000518744 317 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR5701-3-201ENST00000578890 82 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR4765-201ENST00000585007 77 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR5701-1-201ENST00000585138 82 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR1302-2-201ENST00000607096 138 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR5701-2-201ENST00000615634 82 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR6075-201ENST00000620782 95 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 AC233981.2-201ENST00000611524 1614 ntBASIC2.52□□□□□ -2.01
SHFQ7M4L6 Z75746.1-201ENST00000440243 2080 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AP000560.1-201ENST00000624150 1937 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 Y_RNA.128-201ENST00000363391 112 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 XGY1-201ENST00000381172 446 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 RNU1-109P-201ENST00000383960 147 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 Y_RNA.445-201ENST00000384168 102 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNORA29-201ENST00000384183 140 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 MIR186-201ENST00000384988 86 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 MIR34B-201ENST00000385076 84 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms