Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC099677.2-201ENST00000436385 175 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.66□□□□□ -2.51
VPS13CQ709C8 HMGB1P28-201ENST00000507778 552 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC025423.2-201ENST00000537570 439 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC079791.1-201ENST00000605356 973 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC112220.2-201ENST00000605513 533 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC009233.1-201ENST00000616477 371 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AL357080.1-201ENST00000617394 239 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 SNORA25.7-201ENST00000364375 127 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AL079342.2-201ENST00000403367 482 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 MIR1283-2-201ENST00000408621 87 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.66□□□□□ -2.51
VPS13CQ709C8 Z77249.1-201ENST00000444622 1175 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 AC011939.3-201ENST00000613686 466 ntBASIC-0.66□□□□□ -2.51
VPS13CQ709C8 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.66□□□□□ -2.52
VPS13CQ709C8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.66□□□□□ -2.52
VPS13CQ709C8 MTCO3P5-201ENST00000433620 714 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 AC111000.5-201ENST00000506559 1178 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 RNU6-165P-201ENST00000517170 99 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 AC068057.2-201ENST00000624047 895 ntBASIC-0.66□□□□□ -2.52
VPS13CQ709C8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
VPS13CQ709C8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
VPS13CQ709C8 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 MED13P1-201ENST00000428342 171 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS13CQ709C8 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AC022861.1-201ENST00000522981 663 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 RPL23AP91-201ENST00000569211 455 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 ROCK1P1-201ENST00000573767 549 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 MIR3529-201ENST00000637713 78 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 RPL22P22-201ENST00000395439 379 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AC093422.3-201ENST00000428506 305 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AC119674.1-220ENST00000641502 1048 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AL359854.1-201ENST00000614203 1594 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 MTND5P16-201ENST00000460269 1703 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 SNORA48.1-201ENST00000390879 135 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 RNU6-177P-201ENST00000411257 104 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 MIR4263-201ENST00000584745 83 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 FTX_3.1-201ENST00000610451 147 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AL162726.3-218ENST00000636401 95 ntBASIC-0.67□□□□□ -2.52
VPS13CQ709C8 AL161935.2-201ENST00000414627 60 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC004865.1-201ENST00000442276 1003 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RNU7-21P-201ENST00000459430 62 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AL049714.1-201ENST00000466686 347 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC091885.1-201ENST00000506658 268 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RNU6-898P-201ENST00000365627 104 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RNY4P36-201ENST00000391116 96 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RPS26P48-201ENST00000491713 339 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC093303.1-201ENST00000514549 295 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AC067904.2-201ENST00000517322 1283 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AL049870.4-201ENST00000555741 486 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 SNORD32A-201ENST00000364805 84 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RN7SKP19-201ENST00000516016 252 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 RNU6-732P-201ENST00000516033 103 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 SNORA31.10-201ENST00000516482 106 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 AL589743.7-201ENST00000612637 233 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 MTND4P4-201ENST00000439033 1366 ntBASIC-0.68□□□□□ -2.52
VPS13CQ709C8 SNORA25B-201ENST00000365507 128 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.69□□□□□ -2.52
VPS13CQ709C8 MTND1P17-201ENST00000448961 204 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
VPS13CQ709C8 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AL121652.1-201ENST00000608851 448 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 MIR6864-201ENST00000617935 70 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 MIR194-1-201ENST00000384892 85 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 SNORA75.6-201ENST00000391318 127 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 RNU2-3P-201ENST00000410144 191 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC123900.1-201ENST00000420390 96 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AP003716.2-201ENST00000528260 108 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC005094.1-201ENST00000440420 368 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC104332.1-201ENST00000440471 797 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 MTCO3P10-201ENST00000455912 772 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC091959.1-201ENST00000495857 238 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 SNORD79.1-201ENST00000516069 84 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC007349.4-201ENST00000608114 532 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AL133445.2-201ENST00000611191 527 ntBASIC-0.69□□□□□ -2.52
VPS13CQ709C8 AC078974.1-201ENST00000411597 223 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AL714022.1-201ENST00000439897 151 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AC116337.2-201ENST00000477662 156 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.7□□□□□ -2.52
VPS13CQ709C8 COPS8P3-201ENST00000526024 482 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms