Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SKA2P1-201ENST00000425592 390 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MTND1P30-201ENST00000441241 901 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC093534.1-201ENST00000504977 132 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC024589.1-201ENST00000512207 263 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 RNA5SP135-201ENST00000517019 125 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORA70.22-201ENST00000517160 124 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC091805.2-201ENST00000603848 235 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MIR3976-201ENST00000606807 139 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORD3E-202ENST00000627253 216 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 U3.9-201ENST00000363823 204 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MIR140-201ENST00000385282 100 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORA48.1-201ENST00000390879 135 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 TPMTP2-201ENST00000414372 726 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MTND2P5-201ENST00000432656 1006 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MTCO3P18-201ENST00000440206 761 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MTND2P24-201ENST00000453434 806 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MTCO3P7-201ENST00000510008 774 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC116347.2-201ENST00000514912 523 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORD79.1-201ENST00000516069 84 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-782P-201ENST00000516852 104 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC104820.1-201ENST00000624183 307 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AC120349.3-201ENST00000624377 529 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-754P-201ENST00000391166 107 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 MTATP6P27-201ENST00000416987 621 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC098869.1-201ENST00000481627 292 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC093259.1-201ENST00000509755 300 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC048346.1-201ENST00000510247 144 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 SNORA68.3-201ENST00000515906 83 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 SUMO2P16-201ENST00000519475 264 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC136618.2-201ENST00000575091 400 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RPL30P11-203ENST00000598995 310 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AL590229.1-201ENST00000603497 542 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU1-39P-201ENST00000383897 165 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-514P-201ENST00000384208 107 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 MTND4P20-201ENST00000424125 869 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 MTATP6P30-201ENST00000443540 664 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-528P-201ENST00000516926 100 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-703P-201ENST00000516946 107 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 RNU6-840P-201ENST00000517275 65 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC017083.3-201ENST00000609955 700 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 MIR8063-201ENST00000621930 81 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 AC080188.3-201ENST00000624842 748 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.03□□□□□ -2.41
CSPG4Q6UVK1 SNORD115-41-201ENST00000363608 82 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 MIR520A-201ENST00000384862 85 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 MIR1185-1-201ENST00000408598 86 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RNU2-23P-201ENST00000410545 195 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 MTCO2P18-201ENST00000457151 658 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC007363.1-201ENST00000604736 620 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 SEPT14P17-201ENST00000617978 177 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AL390237.1-201ENST00000404226 1415 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RNU6-296P-201ENST00000384608 107 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AL133475.1-201ENST00000404414 305 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC093422.3-201ENST00000428506 305 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RPL7P55-201ENST00000450522 746 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC233266.1-201ENST00000454518 96 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RNU7-59P-201ENST00000459101 61 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 RNU7-90P-201ENST00000459216 62 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC079140.3-201ENST00000511111 550 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 SCARNA8-201ENST00000515924 131 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 IGJP1-201ENST00000522682 475 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms