Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 snoU13.22-201ENST00000459428 104 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 RPL21P10-201ENST00000463521 490 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 SUB1P3-201ENST00000564581 315 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AL713866.2-201ENST00000603579 219 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AC090517.3-201ENST00000625170 141 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 AC069528.2-201ENST00000624849 1991 ntBASIC2.97□□□□□ -1.93
RNF220Q5VTB9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF220Q5VTB9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 RNU6-490P-201ENST00000362985 107 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 MIR490-201ENST00000384865 128 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 HMGB3P2-201ENST00000411913 584 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 MTCYBP10-201ENST00000424905 650 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 Z82188.1-201ENST00000436709 154 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 CYP2C59P-201ENST00000457790 269 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AC090515.1-201ENST00000465295 476 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AC104581.2-201ENST00000572227 430 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AC010928.2-201ENST00000588017 287 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AC005520.5-201ENST00000613926 164 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AL449363.1-201ENST00000617815 186 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AC008121.3-201ENST00000618726 433 ntBASIC2.96□□□□□ -1.94
RNF220Q5VTB9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RNF220Q5VTB9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 SNORD115-32-201ENST00000364079 82 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 SNORA62.3-201ENST00000365110 153 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 MIR200C-201ENST00000384980 68 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 SNORA12.2-201ENST00000391040 156 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RN7SKP27-201ENST00000410684 333 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 snoU13.6-201ENST00000458785 104 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC008155.2-201ENST00000464337 397 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RPS27AP9-201ENST00000477681 438 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC145146.1-201ENST00000496370 254 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 CKS1BP2-201ENST00000497342 240 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC110794.1-201ENST00000505816 425 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC091826.1-201ENST00000514065 313 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RNU6-586P-201ENST00000517265 104 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC034105.4-201ENST00000568304 277 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 MIR2682-201ENST00000580305 110 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AL162713.1-201ENST00000604480 262 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AL080274.1-201ENST00000605565 220 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RMST_6.1-201ENST00000611980 203 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 uc_338.25-201ENST00000613756 156 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AC090971.5-201ENST00000621102 293 ntBASIC2.95□□□□□ -1.94
RNF220Q5VTB9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF220Q5VTB9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.197-201ENST00000364004 102 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 SNORD56.5-201ENST00000364281 72 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RNU4-76P-201ENST00000364509 141 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RNA5SP240-201ENST00000365355 128 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 MIR32-201ENST00000384965 70 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 MIR208B-201ENST00000401172 77 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RNA5SP201-201ENST00000410316 124 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RPS26P42-201ENST00000413485 326 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 AL161788.1-201ENST00000441805 169 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 OR2AQ1P-201ENST00000451972 200 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 AP000705.1-201ENST00000454567 350 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 MIR2053-201ENST00000459295 91 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RNU6-120P-201ENST00000516077 103 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 AC100812.1-201ENST00000607622 580 ntBASIC2.94□□□□□ -1.94
RNF220Q5VTB9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF220Q5VTB9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms