Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR3165-201ENST00000579874 75 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC005021.1-201ENST00000608730 355 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC090116.1-201ENST00000615679 446 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC004865.1-201ENST00000442276 1003 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC113398.2-201ENST00000507630 558 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AP001328.1-201ENST00000528550 176 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC112220.2-201ENST00000605513 533 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL137246.1-201ENST00000607072 977 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL136317.1-201ENST00000612653 226 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC130324.3-201ENST00000614165 542 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU6-756P-201ENST00000383997 107 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU4-27P-201ENST00000410889 139 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL353621.1-201ENST00000418219 243 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC091021.1-201ENST00000468051 388 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC018868.1-201ENST00000491307 315 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 SNORD79.1-201ENST00000516069 84 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP268-201ENST00000516828 124 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU6-165P-201ENST00000517170 99 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL031281.1-201ENST00000604049 488 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL365434.2-201ENST00000607979 234 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL357080.1-201ENST00000617394 239 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC091885.1-201ENST00000506658 268 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC124293.1-201ENST00000530034 493 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU6-23P-201ENST00000363283 107 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MIR593-201ENST00000384856 100 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MTND1P28-201ENST00000435623 950 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC012308.1-201ENST00000451232 178 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RPS20P24-201ENST00000457473 361 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU6-339P-201ENST00000384310 107 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MIR145-201ENST00000384967 88 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL049545.1-201ENST00000401856 572 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 RNU2-48P-201ENST00000410694 191 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL139396.1-201ENST00000421137 167 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC002429.1-201ENST00000437672 148 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MEMO1P3-201ENST00000459811 302 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 AC092447.9-201ENST00000603395 144 ntBASIC-0.34□□□□□ -2.46
VPS13DQ5THJ4 MIR1283-2-201ENST00000408621 87 ntBASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 MTCO3P18-201ENST00000440206 761 ntBASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 MTCO3P7-201ENST00000510008 774 ntBASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.35□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 RNU6-160P-201ENST00000384591 107 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 RNU2-43P-201ENST00000410306 190 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AC127391.1-201ENST00000411737 98 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 RPF2P2-201ENST00000504693 896 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AC114811.1-201ENST00000507207 168 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 CR383656.7-201ENST00000548164 174 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AK6P2-201ENST00000549020 471 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 BNIP3P31-201ENST00000604515 566 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 RNU6-87P-201ENST00000607561 108 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AC119751.3-201ENST00000399720 670 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AL451046.2-201ENST00000403074 277 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 SCARNA17-201ENST00000516183 144 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AP002004.2-201ENST00000531656 154 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AL049870.4-201ENST00000555741 486 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AC138749.5-201ENST00000611461 208 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 AL359697.1-201ENST00000624879 587 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 MTND2P41-201ENST00000637599 773 ntBASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.35□□□□□ -2.47
VPS13DQ5THJ4 RNU6-177P-201ENST00000411257 104 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 USP9YP19-201ENST00000412165 485 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AL512844.2-201ENST00000433990 593 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC005042.3-201ENST00000453230 174 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RPS29P15-201ENST00000458329 171 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AP002453.2-201ENST00000533503 320 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AL356057.1-201ENST00000533798 831 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 MIR4436A-201ENST00000585278 85 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC087685.1-201ENST00000587507 141 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNY4P16-201ENST00000364768 94 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNU6-657P-201ENST00000383904 107 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC068533.2-201ENST00000411872 306 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC005094.1-201ENST00000440420 368 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC023194.1-201ENST00000493084 308 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC124947.2-202ENST00000552735 133 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms