Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RFX7Q2KHR2 RNU5A-8P-201ENST00000364102 114 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNU6-777P-201ENST00000364265 104 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNU6-224P-201ENST00000384055 107 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 Y_RNA.534-201ENST00000384599 112 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AL117342.1-201ENST00000404861 406 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 TXNL1P1-201ENST00000429528 554 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 C8orf59P1-201ENST00000429930 303 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 MTCO2P25-201ENST00000447065 681 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AK3P2-201ENST00000507976 429 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC009646.1-201ENST00000510455 318 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 LRRC34P2-201ENST00000514850 553 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNU5A-4P-201ENST00000516588 111 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 SUMO2P18-201ENST00000518873 252 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 OR8K2P-201ENST00000524645 927 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AL391001.1-201ENST00000602747 715 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC243829.6-201ENST00000612652 106 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC009033.1-201ENST00000624279 431 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNU6-72P-201ENST00000384285 79 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 Y_RNA.623-201ENST00000411128 95 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 MTND4P3-201ENST00000417829 541 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 OR2AQ1P-201ENST00000451972 200 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RNA5SP481-201ENST00000516814 122 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC087894.1-201ENST00000538359 518 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.57□□□□□ -2.32
RFX7Q2KHR2 MZT1P2-201ENST00000604387 248 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
RFX7Q2KHR2 MTND4P16-201ENST00000466108 1367 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 MTCYBP5-201ENST00000423752 1135 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AL627311.1-201ENST00000431514 115 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 MTND4P15-201ENST00000437913 1033 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC134050.1-201ENST00000495088 933 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC005741.1-201ENST00000511094 432 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 SNORA3.4-201ENST00000515969 96 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 RNU6-1092P-201ENST00000516955 87 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC130324.3-201ENST00000614165 542 ntBASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.56□□□□□ -2.32
RFX7Q2KHR2 AC010615.1-201ENST00000594254 1764 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 MIR412-201ENST00000362142 91 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 SNORA4.1-201ENST00000364263 144 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AL669831.1-202ENST00000428504 417 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 MTCO1P27-201ENST00000448269 226 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AC113347.3-201ENST00000509113 148 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AL512310.8-201ENST00000550183 120 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AC015688.6-201ENST00000577737 104 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 MIR4514-201ENST00000581410 57 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AC069114.2-201ENST00000604699 304 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AP002802.2-201ENST00000605877 235 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 RNU6-87P-201ENST00000607561 108 ntBASIC0.55□□□□□ -2.32
RFX7Q2KHR2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
RFX7Q2KHR2 AC073544.1-201ENST00000600110 1595 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC092104.1-201ENST00000497346 1441 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AL589826.1-201ENST00000340697 249 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 SNORD56.1-201ENST00000362913 68 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 Y_RNA.332-201ENST00000365271 113 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 RPS3AP36-201ENST00000398190 775 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 LARP1BP3-201ENST00000437229 869 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC079140.3-201ENST00000511111 550 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 RNU5F-2P-201ENST00000516066 82 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 RNU11-2P-201ENST00000516898 142 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 RNU6-1028P-201ENST00000517164 93 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC036111.3-201ENST00000526389 112 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.54□□□□□ -2.32
RFX7Q2KHR2 BNIP3P26-201ENST00000600827 554 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AL353778.1-201ENST00000603149 408 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC174048.1-201ENST00000603389 144 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AL590229.1-201ENST00000603497 542 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 MIR15A-201ENST00000607334 83 ntBASIC0.54□□□□□ -2.32
RFX7Q2KHR2 AC124016.2-201ENST00000610058 665 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms