Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL359314.1-201ENST00000616913 261 ntBASIC1.72□□□□□ -2.13
RAB40BQ12829 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB40BQ12829 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40BQ12829 AC008555.8-201ENST00000623602 2168 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 Y_RNA.51-201ENST00000362725 102 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 RNU4-56P-201ENST00000364700 142 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SNORD32A-201ENST00000364805 84 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
RAB40BQ12829 RNU6-142P-201ENST00000384019 107 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SNORA70B-201ENST00000384210 135 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SNORA12-201ENST00000391162 147 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SNORA3.2-201ENST00000408221 125 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 MIR1294-201ENST00000408503 142 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 RN7SKP61-201ENST00000410642 295 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.71□□□□□ -2.14
RAB40BQ12829 EIF1AXP1-201ENST00000419267 435 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 BX510359.4-201ENST00000423750 193 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40BQ12829 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40BQ12829 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40BQ12829 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.71□□□□□ -2.14
RAB40BQ12829 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB40BQ12829 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB40BQ12829 RNA5SP401-201ENST00000515920 127 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 RNU6-991P-201ENST00000516168 107 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SNORA31.16-201ENST00000516773 139 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40BQ12829 MIR4424-201ENST00000585257 86 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 NBR2-204ENST00000587322 63 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 VN1R80P-201ENST00000597126 338 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AP000654.2-201ENST00000605633 586 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AP001330.5-201ENST00000607176 411 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AC017083.3-201ENST00000609955 700 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AC013412.1-201ENST00000610687 192 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
RAB40BQ12829 CENPCP1-201ENST00000533085 2578 ntBASIC1.71□□□□□ -2.14
RAB40BQ12829 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAB40BQ12829 MTND5P26-201ENST00000426018 1752 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 U8.2-201ENST00000363156 134 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 Y_RNA.409-201ENST00000383990 98 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RNU6-1106P-201ENST00000390845 107 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RNA5SP465-201ENST00000391195 109 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 MIR1283-2-201ENST00000408621 87 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RN7SKP284-201ENST00000411002 343 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AC078809.1-201ENST00000427601 140 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AL139415.2-201ENST00000431968 163 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RPL7P54-201ENST00000438336 674 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AL353689.1-201ENST00000438895 199 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RAB40BQ12829 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40BQ12829 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 RNU7-138P-201ENST00000459479 64 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 MTCO3P38-201ENST00000468910 766 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC083798.1-201ENST00000472671 131 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RN7SL429P-201ENST00000479090 223 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RN7SL489P-201ENST00000486185 223 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RN7SL327P-201ENST00000488659 223 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 ANXA2P1-201ENST00000505539 926 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC093259.1-201ENST00000509755 300 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40BQ12829 SNORA14.1-201ENST00000516113 141 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RNU6-189P-201ENST00000516120 101 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AC007375.1-201ENST00000554513 578 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40BQ12829 AC008749.1-201ENST00000597650 306 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AL356157.2-201ENST00000605122 111 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC245008.1-201ENST00000608123 476 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 RN7SL853P-201ENST00000617250 223 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 AC005858.4-201ENST00000623191 700 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 MIR6863-201ENST00000636112 90 ntBASIC1.7□□□□□ -2.14
RAB40BQ12829 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RAB40BQ12829 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB40BQ12829 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
RAB40BQ12829 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB40BQ12829 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB40BQ12829 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AC092268.1-201ENST00000342691 405 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 RNU6-1322P-201ENST00000364309 107 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 SNORD32B-201ENST00000364460 84 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RAB40BQ12829 SNORD73A-201ENST00000386062 65 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 RN7SKP223-201ENST00000410582 62 ntBASIC1.69□□□□□ -2.14
RAB40BQ12829 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40BQ12829 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB40BQ12829 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.69□□□□□ -2.14
RAB40BQ12829 RPL23AP3-201ENST00000453844 468 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms