Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 RNA5SP201-201ENST00000410316 124 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 Z92545.1-201ENST00000411782 234 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.07□□□□□ -2.08
SCN1BQ07699 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCN1BQ07699 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 SEPT14P3-201ENST00000439401 183 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 MTND1P1-201ENST00000445453 368 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AL732372.2-207ENST00000445840 183 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN1BQ07699 SEPT14P2-201ENST00000453405 183 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 RPL23AP3-201ENST00000453844 468 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 RNU6-1037P-201ENST00000459571 107 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC019235.1-201ENST00000503847 207 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 SEPT14P4-201ENST00000513445 186 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN1BQ07699 RNU6-1281P-201ENST00000516223 105 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 FO082796.1-201ENST00000523795 183 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 AC021231.3-201ENST00000558497 370 ntBASIC2.07□□□□□ -2.08
SCN1BQ07699 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN1BQ07699 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
SCN1BQ07699 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCN1BQ07699 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN1BQ07699 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN1BQ07699 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SCN1BQ07699 RNU1-58P-201ENST00000362413 163 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 RNU6-1329P-201ENST00000365664 107 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 RNU6-26P-201ENST00000383985 107 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 Y_RNA.436-201ENST00000384097 102 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 ARL5AP1-201ENST00000418991 388 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AL139413.1-201ENST00000421309 217 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN1BQ07699 RPL23AP83-201ENST00000434984 473 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AC008628.2-201ENST00000502605 298 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 RNA5SP320-201ENST00000516263 124 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AL512310.1-201ENST00000548639 172 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AC245505.1-201ENST00000556398 224 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 HMGB1P33-201ENST00000563485 527 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN1BQ07699 AC243960.4-201ENST00000600532 288 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AL033523.1-201ENST00000605153 153 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN1BQ07699 AC068137.3-201ENST00000639191 341 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 OR4G1P-203ENST00000641984 1631 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 AL359851.1-201ENST00000569460 4997 ntBASIC2.06□□□□□ -2.08
SCN1BQ07699 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SCN1BQ07699 AC008555.8-201ENST00000623602 2168 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 Y_RNA.41-201ENST00000362646 102 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 Y_RNA.167-201ENST00000363735 109 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 SNORA80A-201ENST00000363922 136 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 RNU6-483P-201ENST00000384088 108 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 EIF4E2P1-201ENST00000393781 255 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 RNA5SP184-201ENST00000411071 108 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN1BQ07699 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN1BQ07699 MTND3P9-201ENST00000429526 346 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 MRPS10P2-201ENST00000431226 381 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AL359672.1-201ENST00000442302 409 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.05□□□□□ -2.08
SCN1BQ07699 AC132942.1-201ENST00000486753 483 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN1BQ07699 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.05□□□□□ -2.08
SCN1BQ07699 AC105313.1-201ENST00000509121 353 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 SNORD60.2-201ENST00000516883 86 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AK6P1-201ENST00000540219 478 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 EIF4BP1-201ENST00000554881 351 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AL022345.1-201ENST00000607292 135 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 PCGEM1.1-201ENST00000613431 131 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN1BQ07699 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SCN1BQ07699 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.05□□□□□ -2.08
SCN1BQ07699 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SCN1BQ07699 U3.9-201ENST00000363823 204 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 RNU6-522P-201ENST00000364497 107 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 RNU6-378P-201ENST00000384324 107 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SCN1BQ07699 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SCN1BQ07699 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN1BQ07699 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 HMGN2P18-201ENST00000450680 270 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AL109933.2-201ENST00000452651 260 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AC083904.1-201ENST00000487828 231 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AC104564.1-201ENST00000493028 407 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 RPL38P4-201ENST00000502376 214 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AC021146.2-201ENST00000504736 556 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AC025465.4-201ENST00000513422 638 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 RNA5SP356-201ENST00000515972 94 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 RNU6-567P-201ENST00000516746 107 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 CYP4A27P-201ENST00000567218 190 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms