Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 Y_RNA.301-201ENST00000364990 103 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 RNU6-234P-201ENST00000365229 104 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 MIR10A-201ENST00000385043 110 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 MTND3P8-201ENST00000412909 339 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.89□□□□□ -2.11
CKAP4Q07065 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
CKAP4Q07065 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.89□□□□□ -2.11
CKAP4Q07065 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AC124916.1-201ENST00000444020 547 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 RPL7P12-201ENST00000446719 750 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.89□□□□□ -2.11
CKAP4Q07065 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 RPL7P43-201ENST00000478876 753 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 SLC25A15P5-201ENST00000508033 253 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AC107393.1-201ENST00000512403 346 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 RNU4-49P-201ENST00000516080 140 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 Y_RNA.702-201ENST00000516843 96 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AC069113.1-201ENST00000517763 267 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.89□□□□□ -2.11
CKAP4Q07065 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
CKAP4Q07065 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
CKAP4Q07065 MIR4742-201ENST00000581069 85 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.89□□□□□ -2.11
CKAP4Q07065 MIR7157-201ENST00000635801 60 ntBASIC1.89□□□□□ -2.11
CKAP4Q07065 AL136360.1-201ENST00000503377 1900 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 Y_RNA.135-201ENST00000363439 95 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 RNA5SP125-201ENST00000364843 120 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 RNU6-72P-201ENST00000384285 79 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CKAP4Q07065 RNU2-2P-201ENST00000410396 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC022028.1-201ENST00000412054 408 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.88□□□□□ -2.11
CKAP4Q07065 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.88□□□□□ -2.11
CKAP4Q07065 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 RNU7-138P-201ENST00000459479 64 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 AC008628.2-201ENST00000502605 298 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 RNU6-875P-201ENST00000516488 106 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC087854.1-201ENST00000519706 414 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 COPS8P3-201ENST00000526024 482 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AP000763.2-201ENST00000540641 163 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 SCOCP1-201ENST00000554676 349 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC021739.1-201ENST00000559631 174 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 MIR3200-201ENST00000580767 85 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 MIR3672-201ENST00000584290 82 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 MIR3942-201ENST00000585264 109 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC005261.5-201ENST00000596280 355 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC008121.1-201ENST00000603244 268 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC123912.5-201ENST00000605470 343 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AL022345.1-201ENST00000607292 135 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AL357078.3-201ENST00000607528 618 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.15-201ENST00000611544 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.16-201ENST00000613119 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.12-201ENST00000613778 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.20-201ENST00000613956 192 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.9-201ENST00000615427 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.11-201ENST00000616345 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.2-201ENST00000616535 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 AC104260.1-201ENST00000616660 539 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.3-201ENST00000617785 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.19-201ENST00000618602 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 RNU2-1-201ENST00000618664 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.6-201ENST00000619225 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.5-201ENST00000619465 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 U2.10-201ENST00000620268 191 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 SDR42E1P4-201ENST00000620894 481 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 RMST_7.1-201ENST00000621935 268 ntBASIC1.88□□□□□ -2.11
CKAP4Q07065 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CKAP4Q07065 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.88□□□□□ -2.11
CKAP4Q07065 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CKAP4Q07065 RNU6-942P-201ENST00000363002 107 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 RNU5E-4P-201ENST00000364931 120 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 SNORD81.2-201ENST00000365153 76 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 Y_RNA.333-201ENST00000365274 102 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 RNU6-898P-201ENST00000365627 104 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 SNORA32.2-201ENST00000384049 122 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 MIR450B-201ENST00000401182 78 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 RAP1BP3-201ENST00000407180 549 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 SNORD56-201ENST00000413522 71 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 VN1R36P-201ENST00000414936 291 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AC096649.2-201ENST00000416186 393 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AC016831.2-201ENST00000417179 352 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 PGBD4P6-201ENST00000421501 610 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.87□□□□□ -2.11
CKAP4Q07065 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.87□□□□□ -2.11
CKAP4Q07065 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 AMD1P1-201ENST00000457220 922 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms