Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MIR4506-201ENST00000584693 77 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC005046.1-201ENST00000608515 625 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC099778.2-201ENST00000610904 211 ntBASIC2.73□□□□□ -1.97
LTBQ06643 AC004852.3-201ENST00000614131 326 ntBASIC2.73□□□□□ -1.97
LTBQ06643 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LTBQ06643 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
LTBQ06643 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
LTBQ06643 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBQ06643 MIR22-201ENST00000362190 85 ntBASIC2.72□□□□□ -1.97
LTBQ06643 RNU6-595P-201ENST00000363944 107 ntBASIC2.72□□□□□ -1.97
LTBQ06643 SNORD14.1-201ENST00000365609 90 ntBASIC2.72□□□□□ -1.97
LTBQ06643 DYNLT3P1-201ENST00000378574 347 ntBASIC2.72□□□□□ -1.97
LTBQ06643 MIR34A-201ENST00000385130 110 ntBASIC2.72□□□□□ -1.97
LTBQ06643 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LTBQ06643 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 TMEM167AP1-201ENST00000423409 219 ntBASIC2.72□□□□□ -1.97
LTBQ06643 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.72□□□□□ -1.97
LTBQ06643 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 TOMM20P4-201ENST00000427861 435 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AL512844.2-201ENST00000433990 593 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.72□□□□□ -1.97
LTBQ06643 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBQ06643 RNA5SP310-201ENST00000459084 116 ntBASIC2.72□□□□□ -1.97
LTBQ06643 U8.21-201ENST00000459536 136 ntBASIC2.72□□□□□ -1.97
LTBQ06643 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.72□□□□□ -1.97
LTBQ06643 RPL30P5-201ENST00000494923 336 ntBASIC2.72□□□□□ -1.97
LTBQ06643 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.72□□□□□ -1.97
LTBQ06643 AC091826.1-201ENST00000514065 313 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC008885.1-201ENST00000514930 301 ntBASIC2.72□□□□□ -1.97
LTBQ06643 RNU6-377P-201ENST00000515965 102 ntBASIC2.72□□□□□ -1.97
LTBQ06643 SNORD59.2-201ENST00000516873 68 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC109479.2-201ENST00000517842 174 ntBASIC2.72□□□□□ -1.97
LTBQ06643 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC022616.4-201ENST00000522985 181 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.72□□□□□ -1.97
LTBQ06643 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBQ06643 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.72□□□□□ -1.97
LTBQ06643 MIR5701-3-201ENST00000578890 82 ntBASIC2.72□□□□□ -1.97
LTBQ06643 MIR5701-1-201ENST00000585138 82 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBQ06643 AL355598.1-201ENST00000604169 202 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC090425.1-201ENST00000610007 140 ntBASIC2.72□□□□□ -1.97
LTBQ06643 FTX_3.1-201ENST00000610451 147 ntBASIC2.72□□□□□ -1.97
LTBQ06643 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.72□□□□□ -1.97
LTBQ06643 MIR5701-2-201ENST00000615634 82 ntBASIC2.72□□□□□ -1.97
LTBQ06643 AC006111.3-201ENST00000622137 383 ntBASIC2.72□□□□□ -1.97
LTBQ06643 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.72□□□□□ -1.97
LTBQ06643 SNORA50A-202ENST00000629536 136 ntBASIC2.72□□□□□ -1.97
LTBQ06643 U2.21-201ENST00000637295 81 ntBASIC2.72□□□□□ -1.97
LTBQ06643 U4.7-201ENST00000638126 106 ntBASIC2.72□□□□□ -1.97
LTBQ06643 ZNF299P-201ENST00000406845 1804 ntBASIC2.72□□□□□ -1.97
LTBQ06643 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
LTBQ06643 RNU6-78P-201ENST00000362897 107 ntBASIC2.71□□□□□ -1.98
LTBQ06643 Y_RNA.210-201ENST00000364161 110 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-336P-201ENST00000364891 107 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-702P-201ENST00000364982 107 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-217P-201ENST00000384164 104 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-72P-201ENST00000384285 79 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-907P-201ENST00000390924 102 ntBASIC2.71□□□□□ -1.98
LTBQ06643 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LTBQ06643 MIR1302-3-201ENST00000408128 138 ntBASIC2.71□□□□□ -1.98
LTBQ06643 MIR1252-201ENST00000408861 65 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RN7SKP220-201ENST00000410611 288 ntBASIC2.71□□□□□ -1.98
LTBQ06643 EIF4EP2-201ENST00000422816 654 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC022018.1-201ENST00000430685 241 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC108059.2-201ENST00000434626 151 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC079354.2-201ENST00000453523 154 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
LTBQ06643 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.71□□□□□ -1.98
LTBQ06643 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
LTBQ06643 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC009812.2-201ENST00000517657 457 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC131281.1-201ENST00000522984 164 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC040926.1-201ENST00000530195 238 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LTBQ06643 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LTBQ06643 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.71□□□□□ -1.98
LTBQ06643 AC006600.1-201ENST00000572529 153 ntBASIC2.71□□□□□ -1.98
LTBQ06643 ELOCP29-201ENST00000588193 334 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AL355297.3-201ENST00000604082 446 ntBASIC2.71□□□□□ -1.98
LTBQ06643 AL021879.1-201ENST00000611756 288 ntBASIC2.71□□□□□ -1.98
LTBQ06643 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LTBQ06643 MTND5P9-201ENST00000503854 1755 ntBASIC2.71□□□□□ -1.98
LTBQ06643 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LTBQ06643 AC000403.1-201ENST00000613696 3585 ntBASIC2.7□□□□□ -1.98
LTBQ06643 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.7□□□□□ -1.98
LTBQ06643 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
LTBQ06643 RNU5E-7P-201ENST00000365290 117 ntBASIC2.7□□□□□ -1.98
LTBQ06643 Y_RNA.380-201ENST00000365663 111 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RNU6-1222P-201ENST00000384615 107 ntBASIC2.7□□□□□ -1.98
LTBQ06643 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LTBQ06643 RNA5SP494-201ENST00000410653 129 ntBASIC2.7□□□□□ -1.98
LTBQ06643 RNA5SP38-201ENST00000410750 119 ntBASIC2.7□□□□□ -1.98
LTBQ06643 AC092423.1-201ENST00000430165 186 ntBASIC2.7□□□□□ -1.98
LTBQ06643 CBX3P6-201ENST00000430257 527 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms