Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MIR1244-2-201ENST00000636449 85 ntBASIC2.83□□□□□ -1.96
RAE1P78406 MIR1244-4-202ENST00000636813 85 ntBASIC2.83□□□□□ -1.96
RAE1P78406 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.83□□□□□ -1.96
RAE1P78406 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RAE1P78406 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
RAE1P78406 AL353743.1-202ENST00000431724 1695 ntBASIC2.82□□□□□ -1.96
RAE1P78406 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
RAE1P78406 AC008264.2-201ENST00000610193 3731 ntBASIC2.82□□□□□ -1.96
RAE1P78406 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
RAE1P78406 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.82□□□□□ -1.96
RAE1P78406 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.82□□□□□ -1.96
RAE1P78406 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RAE1P78406 RNU5B-2P-201ENST00000363036 113 ntBASIC2.82□□□□□ -1.96
RAE1P78406 Y_RNA.145-201ENST00000363527 102 ntBASIC2.82□□□□□ -1.96
RAE1P78406 SNORD115-32-201ENST00000364079 82 ntBASIC2.82□□□□□ -1.96
RAE1P78406 CD24P4-201ENST00000382840 243 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RNU6-1027P-201ENST00000383998 107 ntBASIC2.82□□□□□ -1.96
RAE1P78406 SNORA29-201ENST00000384183 140 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RN7SKP27-201ENST00000410684 333 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AL358075.3-201ENST00000426289 226 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC092423.1-201ENST00000430165 186 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AL160004.2-201ENST00000432935 350 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC244670.1-201ENST00000436879 112 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RPS29P6-201ENST00000438196 145 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC009969.1-201ENST00000438726 172 ntBASIC2.82□□□□□ -1.96
RAE1P78406 GPM6BP3-201ENST00000442797 145 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.82□□□□□ -1.96
RAE1P78406 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.82□□□□□ -1.96
RAE1P78406 BX510359.1-201ENST00000456973 237 ntBASIC2.82□□□□□ -1.96
RAE1P78406 snoU13.14-201ENST00000459372 104 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RN7SL283P-201ENST00000489055 303 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RPL23AP75-201ENST00000491601 451 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RNU7-175P-201ENST00000515915 61 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC109329.1-201ENST00000518744 317 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC007375.1-201ENST00000554513 578 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC021231.3-201ENST00000558497 370 ntBASIC2.82□□□□□ -1.96
RAE1P78406 RPL23AP78-201ENST00000599928 470 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC116312.1-201ENST00000606841 314 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC002064.3-201ENST00000623448 346 ntBASIC2.82□□□□□ -1.96
RAE1P78406 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.82□□□□□ -1.96
RAE1P78406 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.82□□□□□ -1.96
RAE1P78406 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.82□□□□□ -1.96
RAE1P78406 AL450472.1-202ENST00000637286 180 ntBASIC2.82□□□□□ -1.96
RAE1P78406 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.82□□□□□ -1.96
RAE1P78406 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RAE1P78406 AC005592.1-201ENST00000566527 1640 ntBASIC2.82□□□□□ -1.96
RAE1P78406 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RAE1P78406 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
RAE1P78406 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RAE1P78406 RNA5SP374-201ENST00000362939 125 ntBASIC2.81□□□□□ -1.96
RAE1P78406 SNORD114-19-201ENST00000363072 75 ntBASIC2.81□□□□□ -1.96
RAE1P78406 MIR190B-201ENST00000401119 79 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC138623.1-201ENST00000418060 216 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.81□□□□□ -1.96
RAE1P78406 AC112492.4-201ENST00000456549 352 ntBASIC2.81□□□□□ -1.96
RAE1P78406 snoU13.30-201ENST00000458951 104 ntBASIC2.81□□□□□ -1.96
RAE1P78406 RPS29P2-201ENST00000479278 136 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.81□□□□□ -1.96
RAE1P78406 RAC1P5-201ENST00000512182 576 ntBASIC2.81□□□□□ -1.96
RAE1P78406 Y_RNA.706-201ENST00000516933 99 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC144568.1-201ENST00000520139 137 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.81□□□□□ -1.96
RAE1P78406 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.81□□□□□ -1.96
RAE1P78406 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.81□□□□□ -1.96
RAE1P78406 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.81□□□□□ -1.96
RAE1P78406 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.81□□□□□ -1.96
RAE1P78406 SNORD58B-201ENST00000607313 66 ntBASIC2.81□□□□□ -1.96
RAE1P78406 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.81□□□□□ -1.96
RAE1P78406 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
RAE1P78406 RMST_6.1-201ENST00000611980 203 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC087588.2-201ENST00000617667 426 ntBASIC2.81□□□□□ -1.96
RAE1P78406 UCA1.1-201ENST00000620952 75 ntBASIC2.81□□□□□ -1.96
RAE1P78406 AC138305.3-201ENST00000624988 240 ntBASIC2.81□□□□□ -1.96
RAE1P78406 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.81□□□□□ -1.96
RAE1P78406 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
RAE1P78406 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
RAE1P78406 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAE1P78406 Y_RNA.405-201ENST00000383979 100 ntBASIC2.8□□□□□ -1.96
RAE1P78406 Y_RNA.451-201ENST00000384200 100 ntBASIC2.8□□□□□ -1.96
RAE1P78406 Y_RNA.524-201ENST00000384564 100 ntBASIC2.8□□□□□ -1.96
RAE1P78406 Y_RNA.561-201ENST00000384694 100 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.8□□□□□ -1.96
RAE1P78406 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.8□□□□□ -1.96
RAE1P78406 AC244505.4-201ENST00000434905 287 ntBASIC2.8□□□□□ -1.96
RAE1P78406 Z82188.1-201ENST00000436709 154 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC009296.1-201ENST00000443146 155 ntBASIC2.8□□□□□ -1.96
RAE1P78406 SSXP5-201ENST00000443473 287 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC087477.1-201ENST00000465747 340 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.8□□□□□ -1.96
RAE1P78406 MRPS36P2-201ENST00000512569 299 ntBASIC2.8□□□□□ -1.96
RAE1P78406 SNORA31.6-201ENST00000516241 130 ntBASIC2.8□□□□□ -1.96
RAE1P78406 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.8□□□□□ -1.96
RAE1P78406 AC079598.5-201ENST00000547460 117 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC011471.1-201ENST00000585766 187 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AC010928.2-201ENST00000588017 287 ntBASIC2.8□□□□□ -1.96
RAE1P78406 AL162730.1-201ENST00000605734 292 ntBASIC2.8□□□□□ -1.96
RAE1P78406 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RAE1P78406 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
RAE1P78406 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.79□□□□□ -1.96
RAE1P78406 RNU6-874P-201ENST00000362390 105 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms