Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.62□□□□□ -1.83
HERVK_113P62684 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HERVK_113P62684 HSPE1P20-201ENST00000538133 289 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RPL23AP78-201ENST00000599928 470 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RPL12P50-201ENST00000603116 116 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 AC107871.2-201ENST00000612894 502 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 MIR6134-201ENST00000617606 109 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 Z75746.1-201ENST00000440243 2080 ntBASIC3.62□□□□□ -1.83
HERVK_113P62684 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HERVK_113P62684 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HERVK_113P62684 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113P62684 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HERVK_113P62684 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113P62684 Y_RNA.19-201ENST00000362462 99 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 Y_RNA.26-201ENST00000362539 101 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 Y_RNA.64-201ENST00000362845 102 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 RNU6-806P-201ENST00000365147 105 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 RNU6-1280P-201ENST00000365211 107 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.61□□□□□ -1.83
HERVK_113P62684 SNORD15B-201ENST00000384714 146 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 RNU6-907P-201ENST00000390924 102 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 MIR1302-6-201ENST00000408466 90 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 Z82188.1-201ENST00000436709 154 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 AL353705.4-201ENST00000449661 238 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 AC104564.1-201ENST00000493028 407 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.61□□□□□ -1.83
HERVK_113P62684 RNU6-581P-201ENST00000516214 105 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 RNU6-897P-201ENST00000517135 105 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.61□□□□□ -1.83
HERVK_113P62684 AC104581.2-201ENST00000572227 430 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 AC024581.2-201ENST00000619986 252 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 AC000403.1-201ENST00000613696 3585 ntBASIC3.61□□□□□ -1.83
HERVK_113P62684 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
HERVK_113P62684 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113P62684 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113P62684 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERVK_113P62684 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 AP000560.1-201ENST00000624150 1937 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.6□□□□□ -1.83
HERVK_113P62684 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 RNU6-770P-201ENST00000363929 105 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 RNU6-270P-201ENST00000364131 105 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 Y_RNA.276-201ENST00000364732 109 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 U3.13-201ENST00000364804 214 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 Y_RNA.288-201ENST00000364854 92 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 RPS4XP3-201ENST00000398541 413 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 FTH1P15-201ENST00000406984 280 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.6□□□□□ -1.83
HERVK_113P62684 RPL21P40-201ENST00000428586 483 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 AC243964.1-201ENST00000441814 261 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 AC073476.4-201ENST00000628409 72 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.6□□□□□ -1.83
HERVK_113P62684 ADAM3A-203ENST00000461344 2157 ntBASIC3.6□□□□□ -1.83
HERVK_113P62684 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERVK_113P62684 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.59□□□□□ -1.83
HERVK_113P62684 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HERVK_113P62684 RNU1-76P-201ENST00000362903 159 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 RNA5SP383-201ENST00000362934 120 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AL031659.1-201ENST00000447075 539 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AC012308.1-201ENST00000451232 178 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 MRPL42P6-201ENST00000486397 371 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AC091874.1-201ENST00000511402 339 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 RNU6-794P-201ENST00000517261 64 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC109329.1-201ENST00000518744 317 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC034114.1-201ENST00000520293 285 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 NACAP3-201ENST00000552100 481 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
HERVK_113P62684 AC130454.1-201ENST00000622948 401 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.59□□□□□ -1.83
HERVK_113P62684 U6.98-201ENST00000637157 84 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 AC233263.6-201ENST00000631132 1963 ntBASIC3.59□□□□□ -1.83
HERVK_113P62684 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HERVK_113P62684 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.59□□□□□ -1.83
HERVK_113P62684 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HERVK_113P62684 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
HERVK_113P62684 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HERVK_113P62684 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
HERVK_113P62684 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.58□□□□□ -1.84
HERVK_113P62684 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.58□□□□□ -1.84
HERVK_113P62684 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms