Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.96□□□□□ -2.26
ACTBP60709 ISCA1P6-201ENST00000427740 390 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AL591043.1-201ENST00000432461 424 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.96□□□□□ -2.26
ACTBP60709 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.96□□□□□ -2.26
ACTBP60709 OR2AQ1P-201ENST00000451972 200 ntBASIC0.96□□□□□ -2.26
ACTBP60709 RPS27AP8-201ENST00000452665 445 ntBASIC0.96□□□□□ -2.26
ACTBP60709 TOMM22P6-201ENST00000465035 409 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AC145146.1-201ENST00000496370 254 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AC117522.1-201ENST00000509821 380 ntBASIC0.96□□□□□ -2.26
ACTBP60709 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.96□□□□□ -2.26
ACTBP60709 RNU5A-4P-201ENST00000516588 111 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AP003181.2-201ENST00000528941 181 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.96□□□□□ -2.26
ACTBP60709 AP002453.2-201ENST00000533503 320 ntBASIC0.96□□□□□ -2.26
ACTBP60709 MIR5692A1-201ENST00000580523 69 ntBASIC0.96□□□□□ -2.26
ACTBP60709 MIR4999-201ENST00000585029 91 ntBASIC0.96□□□□□ -2.26
ACTBP60709 NIFKP6-201ENST00000598115 845 ntBASIC0.96□□□□□ -2.26
ACTBP60709 RNU6-87P-201ENST00000607561 108 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AL451064.1-201ENST00000607718 471 ntBASIC0.96□□□□□ -2.26
ACTBP60709 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ACTBP60709 MIR8065-201ENST00000620577 100 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
ACTBP60709 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
ACTBP60709 RNU1-22P-201ENST00000363334 158 ntBASIC0.95□□□□□ -2.26
ACTBP60709 RNU6-533P-201ENST00000384144 107 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MIR513A1-201ENST00000385138 129 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MTCYBP2-201ENST00000407745 171 ntBASIC0.95□□□□□ -2.26
ACTBP60709 OR6C66P-201ENST00000414917 930 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ACTBP60709 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.95□□□□□ -2.26
ACTBP60709 AC245047.4-201ENST00000433189 144 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC000111.3-201ENST00000433478 193 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC243964.1-201ENST00000441814 261 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AL606662.1-201ENST00000445763 553 ntBASIC0.95□□□□□ -2.26
ACTBP60709 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.95□□□□□ -2.26
ACTBP60709 AL163195.1-201ENST00000496941 348 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ACTBP60709 AC091951.3-201ENST00000504093 246 ntBASIC0.95□□□□□ -2.26
ACTBP60709 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MTND3P25-201ENST00000509243 135 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MTND3P5-201ENST00000512798 333 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MTND4LP18-201ENST00000526864 291 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.95□□□□□ -2.26
ACTBP60709 MTND4P33-201ENST00000556706 766 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC090888.2-201ENST00000559765 1144 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
ACTBP60709 MIR3136-201ENST00000583498 78 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AP000811.1-201ENST00000603803 651 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AL359999.1-201ENST00000604513 294 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC138749.5-201ENST00000611461 208 ntBASIC0.95□□□□□ -2.26
ACTBP60709 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AC116165.2-201ENST00000616705 206 ntBASIC0.95□□□□□ -2.26
ACTBP60709 AL391516.1-201ENST00000554380 2449 ntBASIC0.95□□□□□ -2.26
ACTBP60709 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RNU6-1176P-201ENST00000390955 107 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RNA5SP201-201ENST00000410316 124 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RNU6-387P-201ENST00000411331 105 ntBASIC0.94□□□□□ -2.26
ACTBP60709 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.94□□□□□ -2.26
ACTBP60709 RPL21P111-201ENST00000418453 477 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RPS6P15-201ENST00000431996 751 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AC099677.2-201ENST00000436385 175 ntBASIC0.94□□□□□ -2.26
ACTBP60709 HSPE1P9-201ENST00000440046 311 ntBASIC0.94□□□□□ -2.26
ACTBP60709 ATP5EP1-201ENST00000510257 156 ntBASIC0.94□□□□□ -2.26
ACTBP60709 SNORD60.2-201ENST00000516883 86 ntBASIC0.94□□□□□ -2.26
ACTBP60709 RNA5SP437-201ENST00000517249 129 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.94□□□□□ -2.26
ACTBP60709 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.94□□□□□ -2.26
ACTBP60709 AC015688.6-201ENST00000577737 104 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
ACTBP60709 AP003465.2-201ENST00000602571 373 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AC097372.5-201ENST00000623665 376 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AL359740.1-201ENST00000624340 592 ntBASIC0.94□□□□□ -2.26
ACTBP60709 AC095038.3-201ENST00000634439 195 ntBASIC0.94□□□□□ -2.26
ACTBP60709 SNORD98-201ENST00000636377 67 ntBASIC0.94□□□□□ -2.26
ACTBP60709 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.94□□□□□ -2.26
ACTBP60709 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
ACTBP60709 MTND5P35-201ENST00000557537 1720 ntBASIC0.93□□□□□ -2.26
ACTBP60709 SNORA63D-201ENST00000364359 132 ntBASIC0.93□□□□□ -2.26
ACTBP60709 Y_RNA.238-201ENST00000364441 102 ntBASIC0.93□□□□□ -2.26
ACTBP60709 MIR520A-201ENST00000384862 85 ntBASIC0.93□□□□□ -2.26
ACTBP60709 MIR548B-201ENST00000385247 97 ntBASIC0.93□□□□□ -2.26
ACTBP60709 RNA5SP247-201ENST00000411181 105 ntBASIC0.93□□□□□ -2.26
ACTBP60709 AC119618.1-201ENST00000434191 222 ntBASIC0.93□□□□□ -2.26
ACTBP60709 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.93□□□□□ -2.26
ACTBP60709 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.93□□□□□ -2.26
ACTBP60709 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.93□□□□□ -2.26
ACTBP60709 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
ACTBP60709 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.93□□□□□ -2.26
ACTBP60709 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.93□□□□□ -2.26
ACTBP60709 AC098848.2-201ENST00000588023 330 ntBASIC0.93□□□□□ -2.26
ACTBP60709 AL391646.1-201ENST00000603860 190 ntBASIC0.93□□□□□ -2.26
ACTBP60709 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.93□□□□□ -2.26
ACTBP60709 AC019226.2-201ENST00000625973 424 ntBASIC0.93□□□□□ -2.26
ACTBP60709 AL445984.1-201ENST00000637834 659 ntBASIC0.93□□□□□ -2.26
ACTBP60709 AC100821.1-201ENST00000523153 2479 ntBASIC0.93□□□□□ -2.26
ACTBP60709 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.92□□□□□ -2.26
ACTBP60709 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms