Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-1222P-201ENST00000384615 107 ntBASIC2.35□□□□□ -2.03
CDH11P55287 MIR517A-201ENST00000385001 87 ntBASIC2.35□□□□□ -2.03
CDH11P55287 RNU6-1106P-201ENST00000390845 107 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH11P55287 Z98742.2-201ENST00000431564 187 ntBASIC2.35□□□□□ -2.03
CDH11P55287 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH11P55287 RPS15AP7-201ENST00000439294 405 ntBASIC2.35□□□□□ -2.03
CDH11P55287 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC093019.1-201ENST00000443135 252 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC107399.1-201ENST00000451226 265 ntBASIC2.35□□□□□ -2.03
CDH11P55287 snoU13.14-201ENST00000459372 104 ntBASIC2.35□□□□□ -2.03
CDH11P55287 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH11P55287 AC091874.1-201ENST00000511402 339 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC026782.1-201ENST00000512952 449 ntBASIC2.35□□□□□ -2.03
CDH11P55287 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.35□□□□□ -2.03
CDH11P55287 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH11P55287 AP005902.1-201ENST00000521358 186 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.35□□□□□ -2.03
CDH11P55287 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.35□□□□□ -2.03
CDH11P55287 MIR4298-201ENST00000584380 73 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC243960.4-201ENST00000600532 288 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC078795.3-201ENST00000602913 472 ntBASIC2.35□□□□□ -2.03
CDH11P55287 AC016727.1-205ENST00000605437 569 ntBASIC2.35□□□□□ -2.03
CDH11P55287 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 AL359757.2-201ENST00000624309 274 ntBASIC2.35□□□□□ -2.03
CDH11P55287 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.35□□□□□ -2.03
CDH11P55287 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
CDH11P55287 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
CDH11P55287 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
CDH11P55287 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDH11P55287 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH11P55287 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CDH11P55287 RNU6-227P-201ENST00000362865 103 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RNU1-72P-201ENST00000362976 153 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RNU6-593P-201ENST00000364716 112 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RNU6-596P-201ENST00000365395 98 ntBASIC2.34□□□□□ -2.03
CDH11P55287 Y_RNA.482-201ENST00000384377 111 ntBASIC2.34□□□□□ -2.03
CDH11P55287 MIR544A-201ENST00000384855 91 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RNU2-25P-201ENST00000411041 191 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RPL37P10-201ENST00000412884 288 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL513477.1-202ENST00000417061 214 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH11P55287 AIMP1P2-201ENST00000425294 312 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL133396.1-201ENST00000432048 687 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC011816.1-201ENST00000441346 546 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH11P55287 FTH1P25-201ENST00000447665 469 ntBASIC2.34□□□□□ -2.03
CDH11P55287 PCMTD1P1-201ENST00000455560 355 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC073901.1-201ENST00000462471 408 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC112771.1-201ENST00000463581 102 ntBASIC2.34□□□□□ -2.03
CDH11P55287 RPL36AP48-201ENST00000485521 314 ntBASIC2.34□□□□□ -2.03
CDH11P55287 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.34□□□□□ -2.03
CDH11P55287 MTND3P22-201ENST00000510932 243 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC026241.1-201ENST00000517873 2142 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH11P55287 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.34□□□□□ -2.03
CDH11P55287 AL356157.2-201ENST00000605122 111 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC018462.2-201ENST00000605375 395 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC124303.1-201ENST00000605703 360 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
CDH11P55287 MIR8076-201ENST00000611401 83 ntBASIC2.34□□□□□ -2.03
CDH11P55287 MIR6128-201ENST00000615528 109 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AC063943.3-201ENST00000615562 356 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL359697.1-201ENST00000624879 587 ntBASIC2.34□□□□□ -2.03
CDH11P55287 AL450472.1-202ENST00000637286 180 ntBASIC2.34□□□□□ -2.03
CDH11P55287 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.03
CDH11P55287 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.34□□□□□ -2.04
CDH11P55287 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CDH11P55287 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.34□□□□□ -2.04
CDH11P55287 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
CDH11P55287 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDH11P55287 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CDH11P55287 AC002543.1-201ENST00000299783 1954 ntBASIC2.33□□□□□ -2.04
CDH11P55287 RNU6-842P-201ENST00000384269 107 ntBASIC2.33□□□□□ -2.04
CDH11P55287 RNU6-306P-201ENST00000384617 107 ntBASIC2.33□□□□□ -2.04
CDH11P55287 RNU6-174P-201ENST00000410406 106 ntBASIC2.33□□□□□ -2.04
CDH11P55287 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH11P55287 AC097463.2-201ENST00000421074 142 ntBASIC2.33□□□□□ -2.04
CDH11P55287 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
CDH11P55287 USP9YP30-201ENST00000430729 455 ntBASIC2.33□□□□□ -2.04
CDH11P55287 DAP3P1-201ENST00000441522 278 ntBASIC2.33□□□□□ -2.04
CDH11P55287 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH11P55287 RPL39P29-201ENST00000447779 157 ntBASIC2.33□□□□□ -2.04
CDH11P55287 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.33□□□□□ -2.04
CDH11P55287 U8.21-201ENST00000459536 136 ntBASIC2.33□□□□□ -2.04
CDH11P55287 RPL30P12-201ENST00000474666 353 ntBASIC2.33□□□□□ -2.04
CDH11P55287 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH11P55287 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.33□□□□□ -2.04
CDH11P55287 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
CDH11P55287 RNU6-1016P-201ENST00000516689 94 ntBASIC2.33□□□□□ -2.04
CDH11P55287 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.33□□□□□ -2.04
CDH11P55287 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
CDH11P55287 MIR4765-201ENST00000585007 77 ntBASIC2.33□□□□□ -2.04
CDH11P55287 AC113139.1-201ENST00000605049 239 ntBASIC2.33□□□□□ -2.04
CDH11P55287 MIR3976-201ENST00000606807 139 ntBASIC2.33□□□□□ -2.04
CDH11P55287 AC104985.2-201ENST00000620598 500 ntBASIC2.33□□□□□ -2.04
CDH11P55287 SNORA43.4-201ENST00000629559 138 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 416.2 ms