Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
VCPP55072 SNORA4-201ENST00000584302 138 ntBASIC2.11□□□□□ -2.07
VCPP55072 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.11□□□□□ -2.07
VCPP55072 AL096840.1-201ENST00000603287 93 ntBASIC2.11□□□□□ -2.07
VCPP55072 AL136363.2-201ENST00000604173 851 ntBASIC2.11□□□□□ -2.07
VCPP55072 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
VCPP55072 AC093788.1-201ENST00000609356 927 ntBASIC2.11□□□□□ -2.07
VCPP55072 AC022202.1-201ENST00000613515 211 ntBASIC2.11□□□□□ -2.07
VCPP55072 AC068792.1-201ENST00000621354 417 ntBASIC2.11□□□□□ -2.07
VCPP55072 Z69720.2-201ENST00000624755 279 ntBASIC2.11□□□□□ -2.07
VCPP55072 RNU6-78P-201ENST00000362897 107 ntBASIC2.1□□□□□ -2.07
VCPP55072 RNU6-623P-201ENST00000363143 105 ntBASIC2.1□□□□□ -2.07
VCPP55072 Y_RNA.318-201ENST00000365131 97 ntBASIC2.1□□□□□ -2.07
VCPP55072 RNU5E-7P-201ENST00000365290 117 ntBASIC2.1□□□□□ -2.07
VCPP55072 Y_RNA.399-201ENST00000383955 105 ntBASIC2.1□□□□□ -2.07
VCPP55072 Y_RNA.480-201ENST00000384364 102 ntBASIC2.1□□□□□ -2.07
VCPP55072 Y_RNA.517-201ENST00000384551 106 ntBASIC2.1□□□□□ -2.07
VCPP55072 OR9R1P-201ENST00000412200 877 ntBASIC2.1□□□□□ -2.07
VCPP55072 AC138623.1-201ENST00000418060 216 ntBASIC2.1□□□□□ -2.07
VCPP55072 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.1□□□□□ -2.07
VCPP55072 SRRM1P2-201ENST00000464531 1192 ntBASIC2.1□□□□□ -2.07
VCPP55072 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
VCPP55072 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
VCPP55072 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
VCPP55072 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.1□□□□□ -2.07
VCPP55072 AP001893.2-201ENST00000526949 202 ntBASIC2.1□□□□□ -2.07
VCPP55072 MIR5583-1-201ENST00000580941 59 ntBASIC2.1□□□□□ -2.07
VCPP55072 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
VCPP55072 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
VCPP55072 AC098657.3-201ENST00000620434 263 ntBASIC2.1□□□□□ -2.07
VCPP55072 AC091932.3-201ENST00000624223 323 ntBASIC2.1□□□□□ -2.07
VCPP55072 RNU6-1010P-201ENST00000362757 107 ntBASIC2.09□□□□□ -2.07
VCPP55072 RNU6-1322P-201ENST00000364309 107 ntBASIC2.09□□□□□ -2.07
VCPP55072 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
VCPP55072 Y_RNA.481-201ENST00000384373 102 ntBASIC2.09□□□□□ -2.07
VCPP55072 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VCPP55072 AIMP1P2-201ENST00000425294 312 ntBASIC2.09□□□□□ -2.07
VCPP55072 AL161788.1-201ENST00000441805 169 ntBASIC2.09□□□□□ -2.07
VCPP55072 PMCHL2-203ENST00000457791 237 ntBASIC2.09□□□□□ -2.07
VCPP55072 AC083798.1-201ENST00000472671 131 ntBASIC2.09□□□□□ -2.07
VCPP55072 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.09□□□□□ -2.07
VCPP55072 MTCYBP40-201ENST00000509390 1135 ntBASIC2.09□□□□□ -2.07
VCPP55072 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
VCPP55072 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.09□□□□□ -2.07
VCPP55072 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.09□□□□□ -2.07
VCPP55072 BX248123.2-201ENST00000606318 124 ntBASIC2.09□□□□□ -2.07
VCPP55072 uc_338.34-201ENST00000617467 174 ntBASIC2.09□□□□□ -2.07
VCPP55072 AL359880.1-201ENST00000621879 266 ntBASIC2.09□□□□□ -2.07
VCPP55072 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.09□□□□□ -2.07
VCPP55072 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.09□□□□□ -2.08
VCPP55072 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
VCPP55072 RNU6-37P-201ENST00000362692 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 SNORD56.1-201ENST00000362913 68 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-1085P-201ENST00000363576 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-11P-201ENST00000364234 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCPP55072 RNU6-25P-201ENST00000383873 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-1-201ENST00000383898 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-48P-201ENST00000384161 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-36P-201ENST00000384172 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-4P-201ENST00000384205 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-5P-201ENST00000384238 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-3P-201ENST00000384314 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-16P-201ENST00000384385 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-15P-201ENST00000384534 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-2-201ENST00000384627 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-29P-201ENST00000384637 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-9-201ENST00000384776 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-33P-201ENST00000384793 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
VCPP55072 CALM2P3-201ENST00000400429 449 ntBASIC2.08□□□□□ -2.08
VCPP55072 AL606923.1-201ENST00000406616 190 ntBASIC2.08□□□□□ -2.08
VCPP55072 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.08□□□□□ -2.08
VCPP55072 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
VCPP55072 VN1R108P-201ENST00000431580 830 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.08□□□□□ -2.08
VCPP55072 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.08□□□□□ -2.08
VCPP55072 AC092473.1-201ENST00000441098 221 ntBASIC2.08□□□□□ -2.08
VCPP55072 MTND1P1-201ENST00000445453 368 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.08□□□□□ -2.08
VCPP55072 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.08□□□□□ -2.08
VCPP55072 RNU7-167P-201ENST00000459160 62 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.08□□□□□ -2.08
VCPP55072 AC079140.5-201ENST00000507882 310 ntBASIC2.08□□□□□ -2.08
VCPP55072 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
VCPP55072 SNORA25.17-201ENST00000517184 124 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.08□□□□□ -2.08
VCPP55072 AC107953.1-201ENST00000522216 297 ntBASIC2.08□□□□□ -2.08
VCPP55072 MTND4P7-201ENST00000523876 130 ntBASIC2.08□□□□□ -2.08
VCPP55072 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.08□□□□□ -2.08
VCPP55072 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.08□□□□□ -2.08
VCPP55072 AC245505.1-201ENST00000556398 224 ntBASIC2.08□□□□□ -2.08
VCPP55072 SUB1P3-201ENST00000564581 315 ntBASIC2.08□□□□□ -2.08
VCPP55072 RNU6-6P-201ENST00000606623 107 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC002044.1-201ENST00000606707 158 ntBASIC2.08□□□□□ -2.08
VCPP55072 U4.7-201ENST00000638126 106 ntBASIC2.08□□□□□ -2.08
VCPP55072 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCPP55072 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCPP55072 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
VCPP55072 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms