Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.03□□□□□ -1.92
COPB1P53618 AC006026.2-201ENST00000457376 180 ntBASIC3.03□□□□□ -1.92
COPB1P53618 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.03□□□□□ -1.92
COPB1P53618 AC128713.1-201ENST00000471495 306 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AC083906.5-201ENST00000503722 328 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AC114801.2-201ENST00000503825 781 ntBASIC3.03□□□□□ -1.92
COPB1P53618 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.03□□□□□ -1.92
COPB1P53618 CR383656.8-201ENST00000549046 145 ntBASIC3.03□□□□□ -1.92
COPB1P53618 HMGN2P15-201ENST00000585707 270 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AC009318.2-201ENST00000610917 651 ntBASIC3.03□□□□□ -1.92
COPB1P53618 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.03□□□□□ -1.92
COPB1P53618 AL137790.1-201ENST00000634283 177 ntBASIC3.03□□□□□ -1.92
COPB1P53618 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.92
COPB1P53618 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
COPB1P53618 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
COPB1P53618 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COPB1P53618 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
COPB1P53618 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-595P-201ENST00000363944 107 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-99P-201ENST00000364721 107 ntBASIC3.02□□□□□ -1.93
COPB1P53618 Y_RNA.364-201ENST00000365532 101 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-784P-201ENST00000384330 106 ntBASIC3.02□□□□□ -1.93
COPB1P53618 Y_RNA.577-201ENST00000384794 101 ntBASIC3.02□□□□□ -1.93
COPB1P53618 SNORA26.7-201ENST00000391288 122 ntBASIC3.02□□□□□ -1.93
COPB1P53618 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPB1P53618 FTH1P15-201ENST00000406984 280 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-985P-201ENST00000410182 104 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNA5SP38-201ENST00000410750 119 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AP000275.1-201ENST00000411943 390 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC023141.4-201ENST00000412031 328 ntBASIC3.02□□□□□ -1.93
COPB1P53618 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.02□□□□□ -1.93
COPB1P53618 AC104332.2-201ENST00000429959 156 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.02□□□□□ -1.93
COPB1P53618 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.02□□□□□ -1.93
COPB1P53618 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPB1P53618 AC099799.1-201ENST00000439809 192 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RPS29P26-201ENST00000477483 171 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC116655.1-201ENST00000508324 901 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-1046P-201ENST00000516538 107 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU4-77P-201ENST00000516692 156 ntBASIC3.02□□□□□ -1.93
COPB1P53618 RNU6-711P-201ENST00000517255 106 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.02□□□□□ -1.93
COPB1P53618 AC023442.1-201ENST00000531247 422 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
COPB1P53618 AC092447.9-201ENST00000603395 144 ntBASIC3.02□□□□□ -1.93
COPB1P53618 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.02□□□□□ -1.93
COPB1P53618 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.02□□□□□ -1.93
COPB1P53618 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.02□□□□□ -1.93
COPB1P53618 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
COPB1P53618 ZNF299P-201ENST00000406845 1804 ntBASIC3.02□□□□□ -1.93
COPB1P53618 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COPB1P53618 MTND5P9-201ENST00000503854 1755 ntBASIC3.02□□□□□ -1.93
COPB1P53618 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COPB1P53618 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.01□□□□□ -1.93
COPB1P53618 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COPB1P53618 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COPB1P53618 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COPB1P53618 SNORA80A-201ENST00000363922 136 ntBASIC3.01□□□□□ -1.93
COPB1P53618 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COPB1P53618 Y_RNA.645-201ENST00000391229 102 ntBASIC3.01□□□□□ -1.93
COPB1P53618 MIR1289-1-201ENST00000408836 144 ntBASIC3.01□□□□□ -1.93
COPB1P53618 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.01□□□□□ -1.93
COPB1P53618 AC243964.1-201ENST00000441814 261 ntBASIC3.01□□□□□ -1.93
COPB1P53618 AC025750.2-201ENST00000442609 450 ntBASIC3.01□□□□□ -1.93
COPB1P53618 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.01□□□□□ -1.93
COPB1P53618 MTND5P22-201ENST00000458380 195 ntBASIC3.01□□□□□ -1.93
COPB1P53618 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.01□□□□□ -1.93
COPB1P53618 MRPL42P6-201ENST00000486397 371 ntBASIC3.01□□□□□ -1.93
COPB1P53618 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.01□□□□□ -1.93
COPB1P53618 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
COPB1P53618 RNU6-581P-201ENST00000516214 105 ntBASIC3.01□□□□□ -1.93
COPB1P53618 Y_RNA.720-201ENST00000517166 92 ntBASIC3.01□□□□□ -1.93
COPB1P53618 AC006199.1-201ENST00000548728 219 ntBASIC3.01□□□□□ -1.93
COPB1P53618 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.01□□□□□ -1.93
COPB1P53618 SNORD58B-201ENST00000607313 66 ntBASIC3.01□□□□□ -1.93
COPB1P53618 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.01□□□□□ -1.93
COPB1P53618 HMGB1P24-202ENST00000615653 685 ntBASIC3.01□□□□□ -1.93
COPB1P53618 AC097372.5-201ENST00000623665 376 ntBASIC3.01□□□□□ -1.93
COPB1P53618 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.01□□□□□ -1.93
COPB1P53618 AC241585.2-209ENST00000638217 143 ntBASIC3.01□□□□□ -1.93
COPB1P53618 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COPB1P53618 MAPK10-322ENST00000641485 4530 ntBASIC3.01□□□□□ -1.93
COPB1P53618 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
COPB1P53618 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3□□□□□ -1.93
COPB1P53618 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COPB1P53618 Y_RNA.80-201ENST00000362996 102 ntBASIC3□□□□□ -1.93
COPB1P53618 Y_RNA.459-201ENST00000384251 102 ntBASIC3□□□□□ -1.93
COPB1P53618 SNORD116-20-201ENST00000384529 92 ntBASIC3□□□□□ -1.93
COPB1P53618 RNU6-1156P-201ENST00000410365 100 ntBASIC3□□□□□ -1.93
COPB1P53618 RNU2-23P-201ENST00000410545 195 ntBASIC3□□□□□ -1.93
COPB1P53618 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3□□□□□ -1.93
COPB1P53618 AC074117.2-201ENST00000417130 397 ntBASIC3□□□□□ -1.93
COPB1P53618 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
COPB1P53618 AL358176.2-201ENST00000425769 204 ntBASIC3□□□□□ -1.93
COPB1P53618 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3□□□□□ -1.93
COPB1P53618 AC007969.2-201ENST00000441891 191 ntBASIC3□□□□□ -1.93
COPB1P53618 AL031659.1-201ENST00000447075 539 ntBASIC3□□□□□ -1.93
COPB1P53618 CHEK2P4-201ENST00000450340 246 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms