Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR96-201ENST00000362288 78 ntBASIC1.53□□□□□ -2.16
ACLYP53396 RNU1-22P-201ENST00000363334 158 ntBASIC1.53□□□□□ -2.16
ACLYP53396 RNY4P34-201ENST00000364779 95 ntBASIC1.53□□□□□ -2.16
ACLYP53396 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
ACLYP53396 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ACLYP53396 RNU6-1245P-201ENST00000411130 106 ntBASIC1.53□□□□□ -2.16
ACLYP53396 RPS3AP3-201ENST00000411933 242 ntBASIC1.53□□□□□ -2.16
ACLYP53396 MTND1P30-201ENST00000441241 901 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AC079781.2-201ENST00000446424 169 ntBASIC1.53□□□□□ -2.16
ACLYP53396 MTCYBP1-201ENST00000454315 1119 ntBASIC1.53□□□□□ -2.16
ACLYP53396 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
ACLYP53396 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.53□□□□□ -2.16
ACLYP53396 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.53□□□□□ -2.16
ACLYP53396 AC106038.2-201ENST00000520706 568 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AP001372.4-201ENST00000524889 472 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AP001893.2-201ENST00000526949 202 ntBASIC1.53□□□□□ -2.16
ACLYP53396 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
ACLYP53396 MIR3682-201ENST00000581338 84 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AL034555.1-201ENST00000604816 211 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AC104073.3-201ENST00000610942 955 ntBASIC1.53□□□□□ -2.16
ACLYP53396 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
ACLYP53396 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.53□□□□□ -2.16
ACLYP53396 RNU6-1287P-201ENST00000362914 107 ntBASIC1.52□□□□□ -2.17
ACLYP53396 RNU6-1285P-201ENST00000363480 105 ntBASIC1.52□□□□□ -2.17
ACLYP53396 SNORD32B-201ENST00000364460 84 ntBASIC1.52□□□□□ -2.17
ACLYP53396 SNORA72.3-201ENST00000365074 132 ntBASIC1.52□□□□□ -2.17
ACLYP53396 RNU6-1060P-201ENST00000384664 107 ntBASIC1.52□□□□□ -2.17
ACLYP53396 AL357139.1-201ENST00000407792 426 ntBASIC1.52□□□□□ -2.17
ACLYP53396 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.52□□□□□ -2.17
ACLYP53396 AC010099.3-201ENST00000423896 409 ntBASIC1.52□□□□□ -2.17
ACLYP53396 AC079448.1-201ENST00000449377 373 ntBASIC1.52□□□□□ -2.17
ACLYP53396 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
ACLYP53396 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.52□□□□□ -2.17
ACLYP53396 AC027575.1-201ENST00000481064 460 ntBASIC1.52□□□□□ -2.17
ACLYP53396 RNVU1-2-201ENST00000516326 135 ntBASIC1.52□□□□□ -2.17
ACLYP53396 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
ACLYP53396 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.52□□□□□ -2.17
ACLYP53396 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.52□□□□□ -2.17
ACLYP53396 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.52□□□□□ -2.17
ACLYP53396 COPS8P3-201ENST00000526024 482 ntBASIC1.52□□□□□ -2.17
ACLYP53396 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
ACLYP53396 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
ACLYP53396 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
ACLYP53396 MIR6734-201ENST00000621166 68 ntBASIC1.52□□□□□ -2.17
ACLYP53396 AC011155.2-201ENST00000623202 216 ntBASIC1.52□□□□□ -2.17
ACLYP53396 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
ACLYP53396 ZNF680P1-201ENST00000436625 1469 ntBASIC1.51□□□□□ -2.17
ACLYP53396 RNA5SP493-201ENST00000364115 91 ntBASIC1.51□□□□□ -2.17
ACLYP53396 Y_RNA.324-201ENST00000365165 102 ntBASIC1.51□□□□□ -2.17
ACLYP53396 RNU6-715P-201ENST00000365204 103 ntBASIC1.51□□□□□ -2.17
ACLYP53396 Y_RNA.560-201ENST00000384689 102 ntBASIC1.51□□□□□ -2.17
ACLYP53396 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
ACLYP53396 RNA5SP100-201ENST00000410903 110 ntBASIC1.51□□□□□ -2.17
ACLYP53396 RNA5SP59-201ENST00000410922 110 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.51□□□□□ -2.17
ACLYP53396 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.51□□□□□ -2.17
ACLYP53396 GPR143P-201ENST00000434155 205 ntBASIC1.51□□□□□ -2.17
ACLYP53396 RNU6-333P-201ENST00000459117 107 ntBASIC1.51□□□□□ -2.17
ACLYP53396 MTCYBP18-201ENST00000501056 747 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC022447.4-201ENST00000504053 364 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.51□□□□□ -2.17
ACLYP53396 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC011604.1-201ENST00000545978 196 ntBASIC1.51□□□□□ -2.17
ACLYP53396 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.51□□□□□ -2.17
ACLYP53396 MIR3169-201ENST00000578032 83 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
ACLYP53396 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC008250.2-201ENST00000615261 205 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
ACLYP53396 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.51□□□□□ -2.17
ACLYP53396 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
ACLYP53396 AL133216.2-202ENST00000634512 349 ntBASIC1.51□□□□□ -2.17
ACLYP53396 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
ACLYP53396 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-37P-201ENST00000362692 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-11P-201ENST00000364234 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU4-42P-201ENST00000364738 142 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-25P-201ENST00000383873 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-48P-201ENST00000384161 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-16P-201ENST00000384385 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-15P-201ENST00000384534 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-29P-201ENST00000384637 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
ACLYP53396 MIR30A-201ENST00000385092 71 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ACLYP53396 AC243964.1-201ENST00000441814 261 ntBASIC1.5□□□□□ -2.17
ACLYP53396 MTND2P4-201ENST00000445034 1004 ntBASIC1.5□□□□□ -2.17
ACLYP53396 ART2BP-201ENST00000453501 499 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.5□□□□□ -2.17
ACLYP53396 AL162395.1-201ENST00000457882 422 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AC145146.1-201ENST00000496370 254 ntBASIC1.5□□□□□ -2.17
ACLYP53396 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.5□□□□□ -2.17
ACLYP53396 MTND3P5-201ENST00000512798 333 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-377P-201ENST00000515965 102 ntBASIC1.5□□□□□ -2.17
ACLYP53396 RNU6-1178P-201ENST00000516674 107 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AP003072.2-201ENST00000527756 676 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.5□□□□□ -2.17
ACLYP53396 AP005136.1-201ENST00000579765 429 ntBASIC1.5□□□□□ -2.17
ACLYP53396 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms