Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.36□□□□□ -2.03
PDX1P52945 AC023141.11-201ENST00000508864 202 ntBASIC2.36□□□□□ -2.03
PDX1P52945 AC091874.1-201ENST00000511402 339 ntBASIC2.36□□□□□ -2.03
PDX1P52945 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 AC118273.2-201ENST00000532092 465 ntBASIC2.36□□□□□ -2.03
PDX1P52945 AC010186.2-204ENST00000537668 439 ntBASIC2.36□□□□□ -2.03
PDX1P52945 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.36□□□□□ -2.03
PDX1P52945 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
PDX1P52945 MIR3117-201ENST00000584034 78 ntBASIC2.36□□□□□ -2.03
PDX1P52945 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 AC073410.2-201ENST00000603240 332 ntBASIC2.36□□□□□ -2.03
PDX1P52945 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.36□□□□□ -2.03
PDX1P52945 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PDX1P52945 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDX1P52945 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.36□□□□□ -2.03
PDX1P52945 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
PDX1P52945 RNU6-212P-201ENST00000362642 104 ntBASIC2.35□□□□□ -2.03
PDX1P52945 SNORD114-19-201ENST00000363072 75 ntBASIC2.35□□□□□ -2.03
PDX1P52945 SNORD32A-201ENST00000364805 84 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RNU6-767P-201ENST00000384132 107 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RNA5SP390-201ENST00000410191 113 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AL030996.1-201ENST00000411430 235 ntBASIC2.35□□□□□ -2.03
PDX1P52945 MTND3P8-201ENST00000412909 339 ntBASIC2.35□□□□□ -2.03
PDX1P52945 EIF4EP4-201ENST00000424916 578 ntBASIC2.35□□□□□ -2.03
PDX1P52945 PPP1R2P5-201ENST00000457256 603 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RPS29P27-201ENST00000463711 170 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC130509.1-201ENST00000464158 433 ntBASIC2.35□□□□□ -2.03
PDX1P52945 SNRPGP7-201ENST00000469016 106 ntBASIC2.35□□□□□ -2.03
PDX1P52945 HMGN1P12-201ENST00000499125 195 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC096745.1-201ENST00000509945 370 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RN7SKP40-201ENST00000517211 242 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.35□□□□□ -2.03
PDX1P52945 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.35□□□□□ -2.03
PDX1P52945 MIR4648-201ENST00000580107 72 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.35□□□□□ -2.03
PDX1P52945 MIR4769-201ENST00000584126 77 ntBASIC2.35□□□□□ -2.03
PDX1P52945 VN1R107P-201ENST00000601784 209 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AL158827.2-201ENST00000602494 330 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AL356280.1-201ENST00000603614 379 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AP001836.1-201ENST00000604675 523 ntBASIC2.35□□□□□ -2.03
PDX1P52945 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PDX1P52945 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AL159153.1-201ENST00000619688 317 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC024581.2-201ENST00000619986 252 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
PDX1P52945 AL691447.3-201ENST00000635020 330 ntBASIC2.35□□□□□ -2.03
PDX1P52945 MIR7157-201ENST00000635801 60 ntBASIC2.35□□□□□ -2.03
PDX1P52945 RNU6-845P-201ENST00000362578 103 ntBASIC2.34□□□□□ -2.03
PDX1P52945 Y_RNA.88-201ENST00000363029 99 ntBASIC2.34□□□□□ -2.03
PDX1P52945 U3.13-201ENST00000364804 214 ntBASIC2.34□□□□□ -2.03
PDX1P52945 RNU6-43P-201ENST00000384302 107 ntBASIC2.34□□□□□ -2.03
PDX1P52945 RNU1-57P-201ENST00000384491 166 ntBASIC2.34□□□□□ -2.03
PDX1P52945 RNU6-306P-201ENST00000384617 107 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
PDX1P52945 MTND3P9-201ENST00000429526 346 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AL356320.1-201ENST00000429616 163 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.34□□□□□ -2.03
PDX1P52945 MTND4LP16-201ENST00000440828 295 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
PDX1P52945 RPL39P29-201ENST00000447779 157 ntBASIC2.34□□□□□ -2.03
PDX1P52945 MTND1P17-201ENST00000448961 204 ntBASIC2.34□□□□□ -2.03
PDX1P52945 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.34□□□□□ -2.03
PDX1P52945 RNU6-1037P-201ENST00000459571 107 ntBASIC2.34□□□□□ -2.03
PDX1P52945 PTP4A1P4-201ENST00000512479 322 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.34□□□□□ -2.03
PDX1P52945 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.34□□□□□ -2.03
PDX1P52945 Y_RNA.682-201ENST00000516457 100 ntBASIC2.34□□□□□ -2.03
PDX1P52945 RNU6-612P-201ENST00000516909 102 ntBASIC2.34□□□□□ -2.03
PDX1P52945 RNA5SP454-201ENST00000517231 127 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.34□□□□□ -2.03
PDX1P52945 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.34□□□□□ -2.03
PDX1P52945 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.34□□□□□ -2.03
PDX1P52945 MIR548S-201ENST00000581352 82 ntBASIC2.34□□□□□ -2.03
PDX1P52945 MIR4524B-201ENST00000581569 115 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC005730.3-201ENST00000583067 366 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC091135.1-201ENST00000585943 307 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
PDX1P52945 AC022306.2-201ENST00000617563 647 ntBASIC2.34□□□□□ -2.03
PDX1P52945 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDX1P52945 MTND4P27-201ENST00000450813 1354 ntBASIC2.34□□□□□ -2.04
PDX1P52945 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.34□□□□□ -2.04
PDX1P52945 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.04
PDX1P52945 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDX1P52945 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
PDX1P52945 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
PDX1P52945 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 SNORA72.1-201ENST00000363485 129 ntBASIC2.33□□□□□ -2.04
PDX1P52945 Y_RNA.151-201ENST00000363566 112 ntBASIC2.33□□□□□ -2.04
PDX1P52945 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
PDX1P52945 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
PDX1P52945 RNU6-510P-201ENST00000391239 108 ntBASIC2.33□□□□□ -2.04
PDX1P52945 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDX1P52945 RNU6-1245P-201ENST00000411130 106 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.33□□□□□ -2.04
PDX1P52945 AC003685.2-201ENST00000422795 395 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AIMP1P2-201ENST00000425294 312 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms