Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC119618.1-201ENST00000434191 222 ntBASIC0.74□□□□□ -2.29
RPL28P46779 DYNLT3P2-201ENST00000442517 295 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL28P46779 ATP5J2P3-201ENST00000451550 258 ntBASIC0.74□□□□□ -2.29
RPL28P46779 MTATP6P14-201ENST00000455189 673 ntBASIC0.74□□□□□ -2.29
RPL28P46779 SNRPFP4-201ENST00000456366 242 ntBASIC0.74□□□□□ -2.29
RPL28P46779 snoU13.30-201ENST00000458951 104 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL28P46779 MTCO3P28-201ENST00000513351 515 ntBASIC0.74□□□□□ -2.29
RPL28P46779 RNA5SP404-201ENST00000517118 132 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.74□□□□□ -2.29
RPL28P46779 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL28P46779 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.74□□□□□ -2.29
RPL28P46779 AC091489.2-201ENST00000566263 604 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC023043.2-201ENST00000589678 1026 ntBASIC0.74□□□□□ -2.29
RPL28P46779 HSPE1P19-201ENST00000603327 295 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AL590229.1-201ENST00000603497 542 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC012507.3-201ENST00000603556 477 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AP000942.3-201ENST00000603702 160 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC105148.1-201ENST00000604961 409 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AL031775.1-201ENST00000607014 887 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC092140.2-201ENST00000618027 521 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AL359757.2-201ENST00000624309 274 ntBASIC0.74□□□□□ -2.29
RPL28P46779 AC006927.4-201ENST00000639187 543 ntBASIC0.74□□□□□ -2.29
RPL28P46779 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RPL28P46779 AL391994.1-201ENST00000254724 282 ntBASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-862P-201ENST00000362804 105 ntBASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-438P-201ENST00000365561 103 ntBASIC0.73□□□□□ -2.29
RPL28P46779 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-533P-201ENST00000384144 107 ntBASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-43P-201ENST00000384302 107 ntBASIC0.73□□□□□ -2.29
RPL28P46779 MIR122-201ENST00000385044 85 ntBASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-1245P-201ENST00000411130 106 ntBASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-387P-201ENST00000411331 105 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AC004965.1-201ENST00000413033 213 ntBASIC0.73□□□□□ -2.29
RPL28P46779 C1DP2-201ENST00000418167 426 ntBASIC0.73□□□□□ -2.29
RPL28P46779 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL28P46779 AC092473.1-201ENST00000441098 221 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL28P46779 AC016925.1-201ENST00000458303 298 ntBASIC0.73□□□□□ -2.29
RPL28P46779 TOMM22P6-201ENST00000465035 409 ntBASIC0.73□□□□□ -2.29
RPL28P46779 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL28P46779 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL28P46779 CENPUP1-201ENST00000526649 1202 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AP003181.2-201ENST00000528941 181 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL28P46779 AC084364.2-201ENST00000546924 395 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AL512310.8-201ENST00000550183 120 ntBASIC0.73□□□□□ -2.29
RPL28P46779 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL28P46779 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.73□□□□□ -2.29
RPL28P46779 AC109446.1-201ENST00000566172 220 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.73□□□□□ -2.29
RPL28P46779 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL28P46779 RNU6-87P-201ENST00000607561 108 ntBASIC0.73□□□□□ -2.29
RPL28P46779 AC009033.1-201ENST00000624279 431 ntBASIC0.73□□□□□ -2.29
RPL28P46779 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.73□□□□□ -2.29
RPL28P46779 AL159152.1-201ENST00000635019 2587 ntBASIC0.72□□□□□ -2.29
RPL28P46779 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
RPL28P46779 AL391516.1-201ENST00000554380 2449 ntBASIC0.72□□□□□ -2.29
RPL28P46779 SNORD31B-201ENST00000364977 69 ntBASIC0.72□□□□□ -2.29
RPL28P46779 RNU6-906P-201ENST00000384700 70 ntBASIC0.72□□□□□ -2.29
RPL28P46779 SNORA17.3-201ENST00000391159 129 ntBASIC0.72□□□□□ -2.29
RPL28P46779 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
RPL28P46779 FGF7P8-201ENST00000402994 292 ntBASIC0.72□□□□□ -2.29
RPL28P46779 Y_RNA.608-201ENST00000410647 95 ntBASIC0.72□□□□□ -2.29
RPL28P46779 RPL23AP36-201ENST00000413895 458 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL28P46779 BTF3P4-201ENST00000418852 495 ntBASIC0.72□□□□□ -2.29
RPL28P46779 ARL5AP1-201ENST00000418991 388 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AL590135.1-201ENST00000422215 156 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL28P46779 AC019205.3-201ENST00000424573 156 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC010975.2-201ENST00000427781 588 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC244670.1-201ENST00000436879 112 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.72□□□□□ -2.29
RPL28P46779 AC016700.2-201ENST00000446011 156 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL28P46779 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
RPL28P46779 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC015911.1-201ENST00000495111 156 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL28P46779 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL28P46779 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
RPL28P46779 SNORA31.16-201ENST00000516773 139 ntBASIC0.72□□□□□ -2.29
RPL28P46779 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.72□□□□□ -2.29
RPL28P46779 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL28P46779 AP001893.2-201ENST00000526949 202 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.72□□□□□ -2.29
RPL28P46779 MIR4509-3-201ENST00000578671 94 ntBASIC0.72□□□□□ -2.29
RPL28P46779 MIR4509-2-201ENST00000583920 94 ntBASIC0.72□□□□□ -2.29
RPL28P46779 BNIP3P16-201ENST00000589779 534 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AL359999.1-201ENST00000604513 294 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AL158050.2-201ENST00000605336 568 ntBASIC0.72□□□□□ -2.29
RPL28P46779 MIR3976-201ENST00000606807 139 ntBASIC0.72□□□□□ -2.29
RPL28P46779 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
RPL28P46779 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.72□□□□□ -2.29
RPL28P46779 AC083806.3-201ENST00000614016 455 ntBASIC0.72□□□□□ -2.29
RPL28P46779 MIR4509-1-201ENST00000618224 94 ntBASIC0.72□□□□□ -2.29
RPL28P46779 MIR8065-201ENST00000620577 100 ntBASIC0.72□□□□□ -2.29
RPL28P46779 AC019226.2-201ENST00000625973 424 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms