Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 U4atac.1-201ENST00000618345 95 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 AC008121.3-201ENST00000618726 433 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX2-1P43699 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-1P43699 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NKX2-1P43699 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
NKX2-1P43699 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX2-1P43699 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 RNU6-842P-201ENST00000384269 107 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 SNORA54-201ENST00000384281 123 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 RNU6-933P-201ENST00000384424 107 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 SNORD116-29-201ENST00000384516 83 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 RNU6-851P-201ENST00000384565 107 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 SNORA11-201ENST00000408789 128 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 RNU2-63P-201ENST00000410792 194 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 MTCO2P27-201ENST00000420740 428 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 AC008267.5-201ENST00000424928 265 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 AIMP1P2-201ENST00000425294 312 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.25□□□□□ -2.05
NKX2-1P43699 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AL121594.1-201ENST00000475906 575 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX2-1P43699 RN7SL504P-201ENST00000494496 287 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 ACA59.1-201ENST00000515966 143 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 APOOP3-201ENST00000536787 586 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX2-1P43699 YPEL5P2-201ENST00000605553 359 ntBASIC2.25□□□□□ -2.05
NKX2-1P43699 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NKX2-1P43699 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NKX2-1P43699 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX2-1P43699 KPNA2P1-201ENST00000458289 1591 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 AC092268.1-201ENST00000342691 405 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 Y_RNA.187-201ENST00000363918 113 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RNU6-692P-201ENST00000384496 107 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 BTF3L4P2-201ENST00000392798 346 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 UBA52P6-201ENST00000399822 382 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 Y_RNA.594-201ENST00000410373 140 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 HMGN2P35-201ENST00000412164 270 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 USP9YP30-201ENST00000430729 455 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 BX510359.1-201ENST00000456973 237 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 AC073901.1-201ENST00000462471 408 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RPL30P12-201ENST00000474666 353 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-1P43699 AC097473.1-201ENST00000508142 408 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RNU6-559P-201ENST00000516151 98 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 Y_RNA.670-201ENST00000516255 105 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RNU6-307P-201ENST00000516743 106 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RNU6-273P-201ENST00000516937 96 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-1P43699 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.24□□□□□ -2.05
NKX2-1P43699 AP002404.1-201ENST00000532005 451 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 FRG2DP-202ENST00000566967 323 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RPL30P11-203ENST00000598995 310 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 AL133255.1-201ENST00000606374 441 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-1P43699 AL359757.2-201ENST00000624309 274 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.24□□□□□ -2.05
NKX2-1P43699 MIR3651-201ENST00000630427 90 ntBASIC2.24□□□□□ -2.05
NKX2-1P43699 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
NKX2-1P43699 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-1P43699 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX2-1P43699 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NKX2-1P43699 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX2-1P43699 SNORD50.1-201ENST00000362987 71 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 Y_RNA.460-201ENST00000384255 102 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 RNU6-43P-201ENST00000384302 107 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 RNY4P36-201ENST00000391116 96 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 SNORA75.4-201ENST00000391278 119 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 RNU6-1140P-201ENST00000410517 106 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-1P43699 USMG5P1-201ENST00000425964 177 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC011816.1-201ENST00000441346 546 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AL161788.1-201ENST00000441805 169 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC079354.2-201ENST00000453523 154 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 SRIP1-201ENST00000489235 288 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX2-1P43699 SCGB1D5P-201ENST00000515134 247 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC009812.2-201ENST00000517657 457 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AP000889.1-201ENST00000530968 660 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC093027.1-201ENST00000546698 429 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.23□□□□□ -2.05
NKX2-1P43699 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX2-1P43699 MIR5194-201ENST00000582634 120 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 MIR3136-201ENST00000583498 78 ntBASIC2.23□□□□□ -2.05
NKX2-1P43699 AL713866.2-201ENST00000603579 219 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms