Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFSF9P41273 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 FGF7P2-201ENST00000332473 296 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 Y_RNA.359-201ENST00000365498 102 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 SNORA75-201ENST00000384158 137 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 MIR499A-201ENST00000384903 122 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AL591043.1-201ENST00000432461 424 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.5□□□□□ -2.17
TNFSF9P41273 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AC244505.5-201ENST00000443639 207 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFSF9P41273 SNORD42A-201ENST00000459584 64 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFSF9P41273 MTND3P25-201ENST00000509243 135 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AC018630.3-201ENST00000542637 96 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC110760.3-201ENST00000598794 467 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC121247.2-201ENST00000604776 136 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 Z84480.1-201ENST00000605131 311 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC099842.1-201ENST00000619919 596 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC011155.2-201ENST00000623202 216 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC097520.1-201ENST00000624435 385 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 MIR1248-201ENST00000629190 106 ntBASIC1.5□□□□□ -2.17
TNFSF9P41273 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFSF9P41273 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFSF9P41273 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TNFSF9P41273 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TNFSF9P41273 RNU6-78P-201ENST00000362897 107 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 Y_RNA.201-201ENST00000364052 96 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 SNORA62.1-201ENST00000364287 154 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 SNORA25.9-201ENST00000365087 128 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 SNORD115-7-201ENST00000365306 82 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF9P41273 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF9P41273 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.49□□□□□ -2.17
TNFSF9P41273 AC073614.1-201ENST00000438690 650 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 MTCO1P19-201ENST00000443487 500 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AL033528.1-201ENST00000453780 140 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF9P41273 TPT1P7-201ENST00000458300 517 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.49□□□□□ -2.17
TNFSF9P41273 MTCYBP40-201ENST00000509390 1135 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.49□□□□□ -2.17
TNFSF9P41273 AP003033.1-201ENST00000527244 415 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.49□□□□□ -2.17
TNFSF9P41273 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.49□□□□□ -2.17
TNFSF9P41273 MIR4528-201ENST00000577763 90 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 MIR5583-1-201ENST00000580941 59 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC040904.1-201ENST00000590850 223 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 Z99497.2-201ENST00000603634 310 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 MIR98-201ENST00000606724 119 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AL159153.1-201ENST00000619688 317 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 RMST_7.1-201ENST00000621935 268 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 AC097372.5-201ENST00000623665 376 ntBASIC1.49□□□□□ -2.17
TNFSF9P41273 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TNFSF9P41273 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RNU6-179P-201ENST00000363350 107 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RNU6-234P-201ENST00000365229 104 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RNU5E-7P-201ENST00000365290 117 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RNU6-116P-201ENST00000384042 109 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 MIR544A-201ENST00000384855 91 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.48□□□□□ -2.17
TNFSF9P41273 CYCSP33-201ENST00000414485 327 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 MTATP6P17-201ENST00000431030 672 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 MTCO2P16-201ENST00000436962 677 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 MTND4P32-201ENST00000437189 1237 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.48□□□□□ -2.17
TNFSF9P41273 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RPS29P15-201ENST00000458329 171 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.48□□□□□ -2.17
TNFSF9P41273 MTCYBP18-201ENST00000501056 747 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.48□□□□□ -2.17
TNFSF9P41273 AC009646.1-201ENST00000510455 318 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 Vault.3-201ENST00000516676 95 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.48□□□□□ -2.17
TNFSF9P41273 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.48□□□□□ -2.17
TNFSF9P41273 AL356057.1-201ENST00000533798 831 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.48□□□□□ -2.17
TNFSF9P41273 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AC008088.1-201ENST00000580993 280 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AC091135.1-201ENST00000585943 307 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 AC006566.1-201ENST00000608943 513 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.48□□□□□ -2.17
TNFSF9P41273 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.48□□□□□ -2.17
TNFSF9P41273 Y_RNA.99-201ENST00000363138 105 ntBASIC1.47□□□□□ -2.17
TNFSF9P41273 RNU6-181P-201ENST00000363225 107 ntBASIC1.47□□□□□ -2.17
TNFSF9P41273 Y_RNA.159-201ENST00000363674 87 ntBASIC1.47□□□□□ -2.17
TNFSF9P41273 RNU2-3P-201ENST00000410144 191 ntBASIC1.47□□□□□ -2.17
TNFSF9P41273 RNU2-9P-201ENST00000410194 145 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms