Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.16□□□□□ -2.44
SNCAP37840 AC090888.2-201ENST00000559765 1144 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 MIR4742-201ENST00000581069 85 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.16□□□□□ -2.44
SNCAP37840 AC091805.2-201ENST00000603848 235 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 AL162730.1-201ENST00000605734 292 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 AC116165.2-201ENST00000616705 206 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 AC007792.1-201ENST00000623023 402 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 MIR371B-201ENST00000638082 66 ntBASIC-0.16□□□□□ -2.44
SNCAP37840 SNRPEP3-201ENST00000338402 276 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 SNORA42.1-201ENST00000363515 137 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
SNCAP37840 RAC1P6-201ENST00000423911 575 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 SNRPGP12-201ENST00000449481 213 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 AK3P2-201ENST00000507976 429 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.17□□□□□ -2.44
SNCAP37840 MTATP6P9-201ENST00000515039 680 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 AC106038.2-201ENST00000520706 568 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 AC007834.2-201ENST00000536310 343 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 MIR4666A-201ENST00000580160 79 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 MIR4290-201ENST00000583807 95 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 AL357080.1-201ENST00000617394 239 ntBASIC-0.17□□□□□ -2.44
SNCAP37840 RNU6-212P-201ENST00000362642 104 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 SNORD56.4-201ENST00000363883 71 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 RNU6-166P-201ENST00000384371 107 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 RNU6-796P-201ENST00000391086 107 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 RNU6-575P-201ENST00000411326 105 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.18□□□□□ -2.44
SNCAP37840 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.18□□□□□ -2.44
SNCAP37840 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 AC092427.1-201ENST00000439177 601 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.18□□□□□ -2.44
SNCAP37840 AC012308.1-201ENST00000451232 178 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.18□□□□□ -2.44
SNCAP37840 SNORA70.12-201ENST00000516084 153 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 RNU4-77P-201ENST00000516692 156 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.18□□□□□ -2.44
SNCAP37840 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.18□□□□□ -2.44
SNCAP37840 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 AC068620.3-201ENST00000602749 560 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
SNCAP37840 AL445264.1-201ENST00000621719 171 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 MIR4315-1-201ENST00000636800 73 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 MIR4315-2-201ENST00000640925 73 ntBASIC-0.18□□□□□ -2.44
SNCAP37840 RNU6-222P-201ENST00000362438 107 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 RNU6-97P-201ENST00000363387 104 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 SNORD115-48-201ENST00000364764 76 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SNCAP37840 SNORD116-13-201ENST00000384408 92 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 MIR140-201ENST00000385282 100 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 SNORD65C-201ENST00000390962 71 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 SNORA75.2-201ENST00000391138 150 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 SNORA75.3-201ENST00000391231 150 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AC068533.2-201ENST00000411872 306 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.19□□□□□ -2.44
SNCAP37840 AC013262.1-201ENST00000426710 252 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC-0.19□□□□□ -2.44
SNCAP37840 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.19□□□□□ -2.44
SNCAP37840 RNU7-34P-201ENST00000459394 64 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 snoU13.18-201ENST00000459483 104 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AC092989.1-201ENST00000481235 277 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.19□□□□□ -2.44
SNCAP37840 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.19□□□□□ -2.44
SNCAP37840 AC104229.1-201ENST00000561364 255 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 SNRPGP20-201ENST00000604477 205 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AL355816.2-201ENST00000610049 647 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AC073349.3-201ENST00000617616 186 ntBASIC-0.19□□□□□ -2.44
SNCAP37840 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.19□□□□□ -2.44
SNCAP37840 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
SNCAP37840 AC092268.1-201ENST00000342691 405 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 RNA5SP62-201ENST00000363457 110 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 RNU6-343P-201ENST00000364709 104 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 SNORA36.2-201ENST00000384004 127 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 MTCO2P1-201ENST00000424648 477 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 MTND5P2-201ENST00000442927 1142 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 RNU6-863P-201ENST00000515989 104 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.2□□□□□ -2.44
SNCAP37840 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.2□□□□□ -2.44
SNCAP37840 MIR3136-201ENST00000583498 78 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 AC253576.2-201ENST00000618815 580 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 AL138955.1-201ENST00000622881 1040 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 MTND4P21-201ENST00000453886 1357 ntBASIC-0.2□□□□□ -2.44
SNCAP37840 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SNCAP37840 AL359634.1-202ENST00000404721 284 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 RNA5SP222-201ENST00000411039 105 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AL359704.1-201ENST00000411586 781 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC016831.2-201ENST00000417179 352 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC114981.1-201ENST00000503897 678 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC011406.1-201ENST00000512440 370 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.21□□□□□ -2.44
SNCAP37840 RNU6-922P-201ENST00000516753 99 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC023538.1-201ENST00000534576 736 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC011195.1-201ENST00000578177 177 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.21□□□□□ -2.44
SNCAP37840 RN7SL793P-201ENST00000583259 296 ntBASIC-0.21□□□□□ -2.44
SNCAP37840 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.21□□□□□ -2.44
SNCAP37840 AC080078.2-201ENST00000603766 501 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms