Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MTND3P5-201ENST00000512798 333 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 RNU2-69P-201ENST00000516061 100 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 RNU6-991P-201ENST00000516168 107 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.6□□□□□ -2.15
FDFT1P37268 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.6□□□□□ -2.15
FDFT1P37268 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.6□□□□□ -2.15
FDFT1P37268 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
FDFT1P37268 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.6□□□□□ -2.15
FDFT1P37268 AC068790.2-201ENST00000602601 557 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 AC091805.2-201ENST00000603848 235 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 AC008536.2-201ENST00000607284 349 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 AC073114.1-201ENST00000612027 490 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 ZNF680P1-201ENST00000436625 1469 ntBASIC1.6□□□□□ -2.15
FDFT1P37268 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
FDFT1P37268 RNU6-1285P-201ENST00000363480 105 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 RNU6-336P-201ENST00000364891 107 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 Y_RNA.480-201ENST00000384364 102 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 RNU6-692P-201ENST00000384496 107 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 RNU6-1127P-201ENST00000384580 107 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 MIR504-201ENST00000385065 83 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 SNORA16.2-201ENST00000390991 127 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.59□□□□□ -2.15
FDFT1P37268 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.59□□□□□ -2.15
FDFT1P37268 RPS27AP8-201ENST00000452665 445 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.15
FDFT1P37268 MTCO2P6-201ENST00000463134 685 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC079382.1-201ENST00000493346 557 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC093259.1-201ENST00000509755 300 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
FDFT1P37268 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.59□□□□□ -2.15
FDFT1P37268 TRAV32-201ENST00000553993 340 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
FDFT1P37268 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC025449.1-201ENST00000603896 529 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC010900.2-201ENST00000604508 210 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AL034555.1-201ENST00000604816 211 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 AC002044.1-201ENST00000606707 158 ntBASIC1.59□□□□□ -2.15
FDFT1P37268 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
FDFT1P37268 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
FDFT1P37268 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.16
FDFT1P37268 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
FDFT1P37268 RNU6-606P-201ENST00000384721 111 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.58□□□□□ -2.16
FDFT1P37268 AL031667.1-201ENST00000440222 725 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AL360221.1-201ENST00000445989 335 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AL035666.1-201ENST00000446195 348 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AL031274.1-201ENST00000450334 232 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 BET1P1-201ENST00000482276 359 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AC145146.1-201ENST00000496370 254 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 RNU6-430P-201ENST00000517078 107 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.58□□□□□ -2.16
FDFT1P37268 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.58□□□□□ -2.16
FDFT1P37268 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.58□□□□□ -2.16
FDFT1P37268 AL391840.1-201ENST00000571144 367 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.58□□□□□ -2.16
FDFT1P37268 BNIP3P16-201ENST00000589779 534 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 RSL24D1P11-201ENST00000591045 491 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.58□□□□□ -2.16
FDFT1P37268 AC018889.1-201ENST00000605372 397 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 SNORD98-201ENST00000636377 67 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 AC241585.2-209ENST00000638217 143 ntBASIC1.58□□□□□ -2.16
FDFT1P37268 RNU4-15P-201ENST00000362613 141 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 RNU6-43P-201ENST00000384302 107 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 RNU2-29P-201ENST00000410423 189 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.57□□□□□ -2.16
FDFT1P37268 MTCO2P11-201ENST00000431069 680 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 MTND4P32-201ENST00000437189 1237 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC132479.1-201ENST00000449160 144 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 GMFBP1-201ENST00000467831 427 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC022447.4-201ENST00000504053 364 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 MIR449C-201ENST00000516047 92 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AL356057.1-201ENST00000533798 831 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.57□□□□□ -2.16
FDFT1P37268 AC008752.3-201ENST00000588113 712 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AP000654.2-201ENST00000605633 586 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AC025754.2-201ENST00000606491 432 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 AC109347.2-201ENST00000610220 349 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
FDFT1P37268 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
FDFT1P37268 MTND4P14-201ENST00000435799 1354 ntBASIC1.57□□□□□ -2.16
FDFT1P37268 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms