Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNU6-1083P-201ENST00000384022 107 ntBASIC2.77□□□□□ -1.97
RFC1P35251 U3.26-201ENST00000391236 204 ntBASIC2.77□□□□□ -1.97
RFC1P35251 RNU6-174P-201ENST00000410406 106 ntBASIC2.77□□□□□ -1.97
RFC1P35251 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.77□□□□□ -1.97
RFC1P35251 MTCO2P27-201ENST00000420740 428 ntBASIC2.77□□□□□ -1.97
RFC1P35251 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.77□□□□□ -1.97
RFC1P35251 AC007677.1-201ENST00000445757 515 ntBASIC2.77□□□□□ -1.97
RFC1P35251 AC006026.2-201ENST00000457376 180 ntBASIC2.77□□□□□ -1.97
RFC1P35251 RPL23AP49-201ENST00000492925 468 ntBASIC2.77□□□□□ -1.97
RFC1P35251 AIG1P1-201ENST00000503376 148 ntBASIC2.77□□□□□ -1.97
RFC1P35251 MIR5690-201ENST00000583739 73 ntBASIC2.77□□□□□ -1.97
RFC1P35251 BNIP3P16-201ENST00000589779 534 ntBASIC2.77□□□□□ -1.97
RFC1P35251 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.77□□□□□ -1.97
RFC1P35251 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
RFC1P35251 AL356280.1-201ENST00000603614 379 ntBASIC2.77□□□□□ -1.97
RFC1P35251 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.77□□□□□ -1.97
RFC1P35251 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RFC1P35251 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
RFC1P35251 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RFC1P35251 Y_RNA.138-201ENST00000363462 102 ntBASIC2.76□□□□□ -1.97
RFC1P35251 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
RFC1P35251 RNU6-596P-201ENST00000365395 98 ntBASIC2.76□□□□□ -1.97
RFC1P35251 RNU6-622P-201ENST00000384272 103 ntBASIC2.76□□□□□ -1.97
RFC1P35251 RNU6-790P-201ENST00000384479 105 ntBASIC2.76□□□□□ -1.97
RFC1P35251 RNU6-331P-201ENST00000384724 107 ntBASIC2.76□□□□□ -1.97
RFC1P35251 RNU6-1106P-201ENST00000390845 107 ntBASIC2.76□□□□□ -1.97
RFC1P35251 NDUFB4P4-201ENST00000404822 243 ntBASIC2.76□□□□□ -1.97
RFC1P35251 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFC1P35251 AL354751.2-201ENST00000415471 210 ntBASIC2.76□□□□□ -1.97
RFC1P35251 Z82205.1-201ENST00000428456 297 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MTND3P9-201ENST00000429526 346 ntBASIC2.76□□□□□ -1.97
RFC1P35251 DAP3P1-201ENST00000441522 278 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AL031659.1-201ENST00000447075 539 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.76□□□□□ -1.97
RFC1P35251 Y_RNA.653-201ENST00000459091 95 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.76□□□□□ -1.97
RFC1P35251 AC097473.1-201ENST00000508142 408 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.76□□□□□ -1.97
RFC1P35251 AP005902.1-201ENST00000521358 186 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC004486.1-201ENST00000546846 233 ntBASIC2.76□□□□□ -1.97
RFC1P35251 GTF3AP2-201ENST00000557014 266 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC093249.1-201ENST00000567049 203 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.76□□□□□ -1.97
RFC1P35251 MIR3670-2-201ENST00000582974 65 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MIR3670-1-201ENST00000584160 65 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MIR3670-3-201ENST00000584855 65 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MIR4719-201ENST00000585233 84 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MIR3670-4-201ENST00000612260 65 ntBASIC2.76□□□□□ -1.97
RFC1P35251 MIR7106-201ENST00000612419 65 ntBASIC2.76□□□□□ -1.97
RFC1P35251 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.76□□□□□ -1.97
RFC1P35251 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.76□□□□□ -1.97
RFC1P35251 AC004944.1-201ENST00000517807 3059 ntBASIC2.75□□□□□ -1.97
RFC1P35251 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFC1P35251 RBBP8P1-201ENST00000449447 1844 ntBASIC2.75□□□□□ -1.97
RFC1P35251 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFC1P35251 SNORD42.2-201ENST00000365570 69 ntBASIC2.75□□□□□ -1.97
RFC1P35251 Y_RNA.431-201ENST00000384086 102 ntBASIC2.75□□□□□ -1.97
RFC1P35251 RNU6-19P-201ENST00000384718 107 ntBASIC2.75□□□□□ -1.97
RFC1P35251 RNA5SP210-201ENST00000391034 120 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
RFC1P35251 PTGES3P4-201ENST00000426243 356 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AL591043.1-201ENST00000432461 424 ntBASIC2.75□□□□□ -1.97
RFC1P35251 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 RPL30P15-201ENST00000457129 321 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AC133134.1-201ENST00000466800 359 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 AC093303.1-201ENST00000514549 295 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
RFC1P35251 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 AC109446.1-201ENST00000566172 220 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AC078795.3-201ENST00000602913 472 ntBASIC2.75□□□□□ -1.97
RFC1P35251 AP001836.1-201ENST00000604675 523 ntBASIC2.75□□□□□ -1.97
RFC1P35251 MIR8076-201ENST00000611401 83 ntBASIC2.75□□□□□ -1.97
RFC1P35251 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.75□□□□□ -1.97
RFC1P35251 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.75□□□□□ -1.97
RFC1P35251 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFC1P35251 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFC1P35251 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFC1P35251 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RFC1P35251 SNORD50.1-201ENST00000362987 71 ntBASIC2.74□□□□□ -1.97
RFC1P35251 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
RFC1P35251 Y_RNA.187-201ENST00000363918 113 ntBASIC2.74□□□□□ -1.97
RFC1P35251 RNU6-933P-201ENST00000384424 107 ntBASIC2.74□□□□□ -1.97
RFC1P35251 MIR521-1-201ENST00000384902 87 ntBASIC2.74□□□□□ -1.97
RFC1P35251 AL133475.1-201ENST00000404414 305 ntBASIC2.74□□□□□ -1.97
RFC1P35251 RNU6-1140P-201ENST00000410517 106 ntBASIC2.74□□□□□ -1.97
RFC1P35251 AP000275.1-201ENST00000411943 390 ntBASIC2.74□□□□□ -1.97
RFC1P35251 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
RFC1P35251 AC243428.1-201ENST00000421099 264 ntBASIC2.74□□□□□ -1.97
RFC1P35251 BX276092.3-201ENST00000424182 230 ntBASIC2.74□□□□□ -1.97
RFC1P35251 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
RFC1P35251 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
RFC1P35251 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
RFC1P35251 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.74□□□□□ -1.97
RFC1P35251 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.74□□□□□ -1.97
RFC1P35251 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.74□□□□□ -1.97
RFC1P35251 U8.21-201ENST00000459536 136 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms