Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 AC092451.2-201ENST00000538746 658 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.33□□□□□ -2.36
SDC4P31431 AC068620.3-201ENST00000602749 560 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AL136363.2-201ENST00000604173 851 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AL353765.1-201ENST00000605514 183 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC026741.1-201ENST00000605892 482 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC090186.1-201ENST00000605991 572 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AL138955.1-201ENST00000622881 1040 ntBASIC0.33□□□□□ -2.36
SDC4P31431 MTND5P42-201ENST00000637720 498 ntBASIC0.33□□□□□ -2.36
SDC4P31431 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
SDC4P31431 Y_RNA.122-201ENST00000363331 96 ntBASIC0.32□□□□□ -2.36
SDC4P31431 RNU6-853P-201ENST00000364306 107 ntBASIC0.32□□□□□ -2.36
SDC4P31431 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
SDC4P31431 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.32□□□□□ -2.36
SDC4P31431 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.32□□□□□ -2.36
SDC4P31431 NDUFA5P4-201ENST00000436704 385 ntBASIC0.32□□□□□ -2.36
SDC4P31431 AL122001.1-201ENST00000457027 370 ntBASIC0.32□□□□□ -2.36
SDC4P31431 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.32□□□□□ -2.36
SDC4P31431 MTND1P3-201ENST00000484956 952 ntBASIC0.32□□□□□ -2.36
SDC4P31431 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.32□□□□□ -2.36
SDC4P31431 SNORD79.1-201ENST00000516069 84 ntBASIC0.32□□□□□ -2.36
SDC4P31431 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
SDC4P31431 MIR5708-201ENST00000579723 85 ntBASIC0.32□□□□□ -2.36
SDC4P31431 AC091135.1-201ENST00000585943 307 ntBASIC0.32□□□□□ -2.36
SDC4P31431 SCARNA4-202ENST00000625402 129 ntBASIC0.32□□□□□ -2.36
SDC4P31431 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.32□□□□□ -2.36
SDC4P31431 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
SDC4P31431 MIR942-201ENST00000401111 86 ntBASIC0.31□□□□□ -2.36
SDC4P31431 BTF3L4P1-201ENST00000413813 468 ntBASIC0.31□□□□□ -2.36
SDC4P31431 ELOCP9-201ENST00000418624 239 ntBASIC0.31□□□□□ -2.36
SDC4P31431 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
SDC4P31431 AC011233.1-201ENST00000422812 283 ntBASIC0.31□□□□□ -2.36
SDC4P31431 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.31□□□□□ -2.36
SDC4P31431 USP9YP14-201ENST00000430663 563 ntBASIC0.31□□□□□ -2.36
SDC4P31431 AL445305.1-201ENST00000432577 575 ntBASIC0.31□□□□□ -2.36
SDC4P31431 AC073910.1-201ENST00000445047 438 ntBASIC0.31□□□□□ -2.36
SDC4P31431 MTCO3P15-201ENST00000526563 574 ntBASIC0.31□□□□□ -2.36
SDC4P31431 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.31□□□□□ -2.36
SDC4P31431 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
SDC4P31431 MIR4709-201ENST00000577272 72 ntBASIC0.31□□□□□ -2.36
SDC4P31431 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.31□□□□□ -2.36
SDC4P31431 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.31□□□□□ -2.36
SDC4P31431 MIR8084-201ENST00000614105 89 ntBASIC0.31□□□□□ -2.36
SDC4P31431 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.31□□□□□ -2.36
SDC4P31431 AL158163.2-201ENST00000619110 700 ntBASIC0.31□□□□□ -2.36
SDC4P31431 MTND5P33-201ENST00000571250 1450 ntBASIC0.3□□□□□ -2.36
SDC4P31431 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.3□□□□□ -2.36
SDC4P31431 Y_RNA.623-201ENST00000411128 95 ntBASIC0.3□□□□□ -2.36
SDC4P31431 MTCO3P41-201ENST00000414801 328 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC092809.3-201ENST00000415453 231 ntBASIC0.3□□□□□ -2.36
SDC4P31431 MTND4P20-201ENST00000424125 869 ntBASIC0.3□□□□□ -2.36
SDC4P31431 MTCO3P18-201ENST00000440206 761 ntBASIC0.3□□□□□ -2.36
SDC4P31431 EEF1E1P1-201ENST00000446998 430 ntBASIC0.3□□□□□ -2.36
SDC4P31431 ART2BP-201ENST00000453501 499 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.3□□□□□ -2.36
SDC4P31431 MTCO3P7-201ENST00000510008 774 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.3□□□□□ -2.36
SDC4P31431 RNU6-914P-201ENST00000516749 109 ntBASIC0.3□□□□□ -2.36
SDC4P31431 SUMO2P16-201ENST00000519475 264 ntBASIC0.3□□□□□ -2.36
SDC4P31431 DEFB131D-201ENST00000526803 184 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AL353778.1-201ENST00000603149 408 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC018889.1-201ENST00000605372 397 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC006270.3-201ENST00000605967 1036 ntBASIC0.3□□□□□ -2.36
SDC4P31431 AC023158.2-201ENST00000614876 543 ntBASIC0.3□□□□□ -2.36
SDC4P31431 MIR6515-201ENST00000619843 57 ntBASIC0.3□□□□□ -2.36
SDC4P31431 RNU1-96P-201ENST00000364163 162 ntBASIC0.29□□□□□ -2.36
SDC4P31431 RNU6-945P-201ENST00000383947 107 ntBASIC0.29□□□□□ -2.36
SDC4P31431 UBE2V1P15-201ENST00000407776 448 ntBASIC0.29□□□□□ -2.36
SDC4P31431 RNA5SP111-201ENST00000411386 101 ntBASIC0.29□□□□□ -2.36
SDC4P31431 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.29□□□□□ -2.36
SDC4P31431 AL627311.1-201ENST00000431514 115 ntBASIC0.29□□□□□ -2.36
SDC4P31431 AL158053.1-201ENST00000441503 453 ntBASIC0.29□□□□□ -2.36
SDC4P31431 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.29□□□□□ -2.36
SDC4P31431 NDUFB1P2-201ENST00000449477 176 ntBASIC0.29□□□□□ -2.36
SDC4P31431 GAPDHP17-201ENST00000449858 1001 ntBASIC0.29□□□□□ -2.36
SDC4P31431 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.29□□□□□ -2.36
SDC4P31431 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.29□□□□□ -2.36
SDC4P31431 MTCYBP1-201ENST00000454315 1119 ntBASIC0.29□□□□□ -2.36
SDC4P31431 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.29□□□□□ -2.36
SDC4P31431 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.29□□□□□ -2.36
SDC4P31431 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.29□□□□□ -2.36
SDC4P31431 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.29□□□□□ -2.36
SDC4P31431 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.29□□□□□ -2.36
SDC4P31431 AC112191.3-201ENST00000604371 277 ntBASIC0.29□□□□□ -2.36
SDC4P31431 AL354696.1-201ENST00000614652 497 ntBASIC0.29□□□□□ -2.36
SDC4P31431 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SDC4P31431 AL159152.1-201ENST00000635019 2587 ntBASIC0.28□□□□□ -2.36
SDC4P31431 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
SDC4P31431 MIR412-201ENST00000362142 91 ntBASIC0.28□□□□□ -2.36
SDC4P31431 SNORD56.1-201ENST00000362913 68 ntBASIC0.28□□□□□ -2.36
SDC4P31431 RNU6-1335P-201ENST00000365426 107 ntBASIC0.28□□□□□ -2.36
SDC4P31431 RNU6-969P-201ENST00000383900 105 ntBASIC0.28□□□□□ -2.36
SDC4P31431 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
SDC4P31431 ZNF886P-201ENST00000450781 723 ntBASIC0.28□□□□□ -2.36
SDC4P31431 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.28□□□□□ -2.36
SDC4P31431 RNU5F-2P-201ENST00000516066 82 ntBASIC0.28□□□□□ -2.36
SDC4P31431 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.28□□□□□ -2.36
SDC4P31431 AC022893.3-201ENST00000607665 437 ntBASIC0.28□□□□□ -2.36
SDC4P31431 AC126177.8-201ENST00000618339 1015 ntBASIC0.28□□□□□ -2.36
SDC4P31431 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms