Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPS12P23-201ENST00000419579 400 ntBASIC4.37□□□□□ -1.71
RXRBP28702 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRBP28702 RNU2-31P-201ENST00000516954 155 ntBASIC4.37□□□□□ -1.71
RXRBP28702 MIR2682-201ENST00000580305 110 ntBASIC4.37□□□□□ -1.71
RXRBP28702 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.37□□□□□ -1.71
RXRBP28702 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RXRBP28702 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RXRBP28702 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RXRBP28702 IPO8P1-201ENST00000455509 3109 ntBASIC4.37□□□□□ -1.71
RXRBP28702 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RXRBP28702 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RXRBP28702 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.82-201ENST00000363000 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.92-201ENST00000363043 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 RNA5SP322-201ENST00000363617 119 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.235-201ENST00000364412 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 SNORA71.1-201ENST00000364523 117 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.306-201ENST00000365015 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.312-201ENST00000365089 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.322-201ENST00000365151 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 RNU6-1117P-201ENST00000384525 104 ntBASIC4.36□□□□□ -1.71
RXRBP28702 MIR10A-201ENST00000385043 110 ntBASIC4.36□□□□□ -1.71
RXRBP28702 RNU4-30P-201ENST00000410245 143 ntBASIC4.36□□□□□ -1.71
RXRBP28702 RNU6-735P-201ENST00000410612 107 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AC079780.1-201ENST00000428259 207 ntBASIC4.36□□□□□ -1.71
RXRBP28702 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AL627311.1-201ENST00000431514 115 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AL139132.1-201ENST00000431587 344 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AL603825.1-201ENST00000438481 80 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AC105272.1-201ENST00000438604 198 ntBASIC4.36□□□□□ -1.71
RXRBP28702 PIGFP3-201ENST00000441918 722 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AL135938.1-201ENST00000443141 297 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.650-201ENST00000459002 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.36□□□□□ -1.71
RXRBP28702 AC074133.1-201ENST00000515696 183 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.777-201ENST00000516982 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.36□□□□□ -1.71
RXRBP28702 MIR4423-201ENST00000580922 80 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.771-201ENST00000598668 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 Y_RNA.789-201ENST00000622480 102 ntBASIC4.36□□□□□ -1.71
RXRBP28702 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RXRBP28702 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RXRBP28702 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RXRBP28702 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RXRBP28702 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.36□□□□□ -1.71
RXRBP28702 AL133412.1-201ENST00000380194 2992 ntBASIC4.35□□□□□ -1.71
RXRBP28702 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RXRBP28702 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RXRBP28702 SDAD1P2-201ENST00000441308 2028 ntBASIC4.35□□□□□ -1.71
RXRBP28702 RNU6-336P-201ENST00000364891 107 ntBASIC4.35□□□□□ -1.71
RXRBP28702 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
RXRBP28702 SNORA53-201ENST00000391141 249 ntBASIC4.35□□□□□ -1.71
RXRBP28702 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.35□□□□□ -1.71
RXRBP28702 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.35□□□□□ -1.71
RXRBP28702 AL049830.2-201ENST00000480072 201 ntBASIC4.35□□□□□ -1.71
RXRBP28702 AC010265.1-201ENST00000513509 211 ntBASIC4.35□□□□□ -1.71
RXRBP28702 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.35□□□□□ -1.71
RXRBP28702 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.35□□□□□ -1.71
RXRBP28702 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.35□□□□□ -1.71
RXRBP28702 UBL5P2-201ENST00000583788 219 ntBASIC4.35□□□□□ -1.71
RXRBP28702 SNORD113-5-201ENST00000607261 78 ntBASIC4.35□□□□□ -1.71
RXRBP28702 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.35□□□□□ -1.71
RXRBP28702 AL590808.1-201ENST00000618696 141 ntBASIC4.35□□□□□ -1.71
RXRBP28702 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RXRBP28702 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RXRBP28702 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RXRBP28702 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RXRBP28702 AC004925.1-201ENST00000624256 2706 ntBASIC4.35□□□□□ -1.71
RXRBP28702 OR4G2P-202ENST00000641004 1759 ntBASIC4.35□□□□□ -1.71
RXRBP28702 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.34□□□□□ -1.71
RXRBP28702 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.34□□□□□ -1.71
RXRBP28702 Y_RNA.304-201ENST00000365011 112 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNU6-926P-201ENST00000384075 107 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNU6-17P-201ENST00000384245 107 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNU6-22P-201ENST00000384355 107 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNU6-18P-201ENST00000384527 107 ntBASIC4.34□□□□□ -1.71
RXRBP28702 MIR514A1-201ENST00000385133 98 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.34□□□□□ -1.71
RXRBP28702 SNORA40C-201ENST00000391285 128 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNA5SP239-201ENST00000410218 129 ntBASIC4.34□□□□□ -1.71
RXRBP28702 Z85995.1-201ENST00000415547 335 ntBASIC4.34□□□□□ -1.71
RXRBP28702 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.34□□□□□ -1.71
RXRBP28702 MTCO1P39-201ENST00000426148 480 ntBASIC4.34□□□□□ -1.71
RXRBP28702 AC022018.1-201ENST00000430685 241 ntBASIC4.34□□□□□ -1.71
RXRBP28702 snoU13.30-201ENST00000458951 104 ntBASIC4.34□□□□□ -1.71
RXRBP28702 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.34□□□□□ -1.71
RXRBP28702 RNU6-1219P-201ENST00000516143 112 ntBASIC4.34□□□□□ -1.71
RXRBP28702 RNY3P16-201ENST00000516338 101 ntBASIC4.34□□□□□ -1.71
RXRBP28702 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RXRBP28702 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RXRBP28702 MIR4782-201ENST00000577987 79 ntBASIC4.34□□□□□ -1.71
RXRBP28702 MIR4308-201ENST00000580634 81 ntBASIC4.34□□□□□ -1.71
RXRBP28702 AC108706.1-201ENST00000611053 297 ntBASIC4.34□□□□□ -1.71
RXRBP28702 AC099506.2-201ENST00000623074 221 ntBASIC4.34□□□□□ -1.71
RXRBP28702 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.34□□□□□ -1.71
RXRBP28702 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.34□□□□□ -1.72
RXRBP28702 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RXRBP28702 AC010733.2-201ENST00000589496 5702 ntBASIC4.34□□□□□ -1.72
RXRBP28702 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms