Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.56□□□□□ -2
ABCD3P28288 AC243972.3-201ENST00000539655 198 ntBASIC2.56□□□□□ -2
ABCD3P28288 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ABCD3P28288 AC026464.5-201ENST00000562497 722 ntBASIC2.56□□□□□ -2
ABCD3P28288 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.56□□□□□ -2
ABCD3P28288 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.56□□□□□ -2
ABCD3P28288 MIR3923-201ENST00000579521 83 ntBASIC2.56□□□□□ -2
ABCD3P28288 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
ABCD3P28288 AC124303.1-201ENST00000605703 360 ntBASIC2.56□□□□□ -2
ABCD3P28288 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.56□□□□□ -2
ABCD3P28288 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ABCD3P28288 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
ABCD3P28288 SNORA43.4-201ENST00000629559 138 ntBASIC2.56□□□□□ -2
ABCD3P28288 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCD3P28288 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
ABCD3P28288 Y_RNA.123-201ENST00000363338 102 ntBASIC2.55□□□□□ -2
ABCD3P28288 Y_RNA.151-201ENST00000363566 112 ntBASIC2.55□□□□□ -2
ABCD3P28288 Y_RNA.166-201ENST00000363730 102 ntBASIC2.55□□□□□ -2
ABCD3P28288 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
ABCD3P28288 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCD3P28288 RNU6-784P-201ENST00000384330 106 ntBASIC2.55□□□□□ -2
ABCD3P28288 MIR517A-201ENST00000385001 87 ntBASIC2.55□□□□□ -2
ABCD3P28288 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.55□□□□□ -2
ABCD3P28288 CBX3P6-201ENST00000430257 527 ntBASIC2.55□□□□□ -2
ABCD3P28288 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.55□□□□□ -2
ABCD3P28288 SNORA59A-201ENST00000459326 152 ntBASIC2.55□□□□□ -2
ABCD3P28288 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
ABCD3P28288 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.55□□□□□ -2
ABCD3P28288 ACA59.1-201ENST00000515966 143 ntBASIC2.55□□□□□ -2
ABCD3P28288 CYP4A27P-201ENST00000567218 190 ntBASIC2.55□□□□□ -2
ABCD3P28288 MIR4790-201ENST00000577799 79 ntBASIC2.55□□□□□ -2
ABCD3P28288 MIR4801-201ENST00000582704 82 ntBASIC2.55□□□□□ -2
ABCD3P28288 FGF7P1-201ENST00000582820 288 ntBASIC2.55□□□□□ -2
ABCD3P28288 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
ABCD3P28288 POLR3GP2-201ENST00000588366 668 ntBASIC2.55□□□□□ -2
ABCD3P28288 Z98751.3-201ENST00000604447 521 ntBASIC2.55□□□□□ -2
ABCD3P28288 AC019193.3-201ENST00000609144 554 ntBASIC2.55□□□□□ -2
ABCD3P28288 AL161423.1-201ENST00000613700 262 ntBASIC2.55□□□□□ -2
ABCD3P28288 AL450472.1-202ENST00000637286 180 ntBASIC2.55□□□□□ -2
ABCD3P28288 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
ABCD3P28288 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCD3P28288 AL365361.1-201ENST00000566942 3481 ntBASIC2.54□□□□□ -2
ABCD3P28288 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
ABCD3P28288 RNU4-15P-201ENST00000362613 141 ntBASIC2.54□□□□□ -2
ABCD3P28288 RNU6-1283P-201ENST00000365314 105 ntBASIC2.54□□□□□ -2
ABCD3P28288 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
ABCD3P28288 AL591034.2-201ENST00000402839 359 ntBASIC2.54□□□□□ -2
ABCD3P28288 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
ABCD3P28288 MTCYBP2-201ENST00000407745 171 ntBASIC2.54□□□□□ -2
ABCD3P28288 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.54□□□□□ -2
ABCD3P28288 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.54□□□□□ -2
ABCD3P28288 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.54□□□□□ -2
ABCD3P28288 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.54□□□□□ -2
ABCD3P28288 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
ABCD3P28288 RNU1-54P-201ENST00000517181 120 ntBASIC2.54□□□□□ -2
ABCD3P28288 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.54□□□□□ -2
ABCD3P28288 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
ABCD3P28288 AC005668.1-201ENST00000571142 476 ntBASIC2.54□□□□□ -2
ABCD3P28288 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
ABCD3P28288 MIR3976-201ENST00000606807 139 ntBASIC2.54□□□□□ -2
ABCD3P28288 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.54□□□□□ -2
ABCD3P28288 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.54□□□□□ -2
ABCD3P28288 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ABCD3P28288 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
ABCD3P28288 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.53□□□□□ -2
ABCD3P28288 RNU1-23P-201ENST00000363361 144 ntBASIC2.53□□□□□ -2
ABCD3P28288 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ABCD3P28288 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
ABCD3P28288 RNU6-546P-201ENST00000383991 107 ntBASIC2.53□□□□□ -2
ABCD3P28288 Y_RNA.597-201ENST00000410463 100 ntBASIC2.53□□□□□ -2
ABCD3P28288 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
ABCD3P28288 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.53□□□□□ -2
ABCD3P28288 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.53□□□□□ -2
ABCD3P28288 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.53□□□□□ -2
ABCD3P28288 AC145146.1-201ENST00000496370 254 ntBASIC2.53□□□□□ -2
ABCD3P28288 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.53□□□□□ -2
ABCD3P28288 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.53□□□□□ -2
ABCD3P28288 RN7SKP132-201ENST00000516001 208 ntBASIC2.53□□□□□ -2
ABCD3P28288 AC118273.2-201ENST00000532092 465 ntBASIC2.53□□□□□ -2
ABCD3P28288 AC022616.8-201ENST00000533569 253 ntBASIC2.53□□□□□ -2
ABCD3P28288 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
ABCD3P28288 AP001094.1-201ENST00000579805 193 ntBASIC2.53□□□□□ -2
ABCD3P28288 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
ABCD3P28288 uc_338.5-201ENST00000611839 155 ntBASIC2.53□□□□□ -2
ABCD3P28288 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ABCD3P28288 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.53□□□□□ -2
ABCD3P28288 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
ABCD3P28288 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.52□□□□□ -2.01
ABCD3P28288 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
ABCD3P28288 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ABCD3P28288 RNU6-845P-201ENST00000362578 103 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 SNORA25B-201ENST00000365507 128 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 RNA5SP201-201ENST00000410316 124 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 RNU2-32P-201ENST00000411193 191 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
ABCD3P28288 NCOR1P3-201ENST00000420479 303 ntBASIC2.52□□□□□ -2.01
ABCD3P28288 AC012306.1-201ENST00000423267 114 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms