Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 DSTNP4-201ENST00000399472 474 ntBASIC-0.88□□□□□ -2.55
VCANP13611 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.88□□□□□ -2.55
VCANP13611 AC023050.1-201ENST00000498198 304 ntBASIC-0.88□□□□□ -2.55
VCANP13611 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.88□□□□□ -2.55
VCANP13611 AC004852.3-201ENST00000614131 326 ntBASIC-0.88□□□□□ -2.55
VCANP13611 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC-0.89□□□□□ -2.55
VCANP13611 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.89□□□□□ -2.55
VCANP13611 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.89□□□□□ -2.55
VCANP13611 MTCO3P7-201ENST00000510008 774 ntBASIC-0.89□□□□□ -2.55
VCANP13611 RNA5SP503-201ENST00000517047 117 ntBASIC-0.89□□□□□ -2.55
VCANP13611 AC002400.1-201ENST00000569310 726 ntBASIC-0.89□□□□□ -2.55
VCANP13611 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC-0.89□□□□□ -2.55
VCANP13611 MTND5P30-201ENST00000452896 1731 ntBASIC-0.89□□□□□ -2.55
VCANP13611 RNU4-79P-201ENST00000362764 141 ntBASIC-0.89□□□□□ -2.55
VCANP13611 RNU1-76P-201ENST00000362903 159 ntBASIC-0.89□□□□□ -2.55
VCANP13611 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.89□□□□□ -2.55
VCANP13611 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.89□□□□□ -2.55
VCANP13611 RNU6-881P-201ENST00000516813 102 ntBASIC-0.89□□□□□ -2.55
VCANP13611 RNU6-586P-201ENST00000517265 104 ntBASIC-0.89□□□□□ -2.55
VCANP13611 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
VCANP13611 RNU6-414P-201ENST00000363705 104 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.9□□□□□ -2.55
VCANP13611 USP9YP25-201ENST00000457708 443 ntBASIC-0.9□□□□□ -2.55
VCANP13611 U7.7-201ENST00000459276 60 ntBASIC-0.9□□□□□ -2.55
VCANP13611 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AC134698.4-201ENST00000523451 826 ntBASIC-0.9□□□□□ -2.55
VCANP13611 SNORA77B-201ENST00000578179 125 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AL590491.3-201ENST00000610731 82 ntBASIC-0.9□□□□□ -2.55
VCANP13611 RNU6-529P-201ENST00000363383 104 ntBASIC-0.9□□□□□ -2.55
VCANP13611 RPL22P22-201ENST00000395439 379 ntBASIC-0.9□□□□□ -2.55
VCANP13611 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AC009233.1-201ENST00000616477 371 ntBASIC-0.9□□□□□ -2.55
VCANP13611 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
VCANP13611 MIR377-201ENST00000362145 69 ntBASIC-0.9□□□□□ -2.55
VCANP13611 MIR335-201ENST00000362173 94 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.9□□□□□ -2.55
VCANP13611 BNIP3P39-201ENST00000601077 554 ntBASIC-0.9□□□□□ -2.55
VCANP13611 AL590396.4-201ENST00000636779 956 ntBASIC-0.9□□□□□ -2.55
VCANP13611 RNU6-226P-201ENST00000363778 107 ntBASIC-0.91□□□□□ -2.55
VCANP13611 SNORA48.1-201ENST00000390879 135 ntBASIC-0.91□□□□□ -2.55
VCANP13611 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.91□□□□□ -2.55
VCANP13611 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.91□□□□□ -2.55
VCANP13611 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.91□□□□□ -2.55
VCANP13611 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.91□□□□□ -2.55
VCANP13611 AL136363.2-201ENST00000604173 851 ntBASIC-0.91□□□□□ -2.55
VCANP13611 AC013468.1-201ENST00000608680 598 ntBASIC-0.91□□□□□ -2.55
VCANP13611 AC010385.1-201ENST00000412374 256 ntBASIC-0.91□□□□□ -2.56
VCANP13611 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.91□□□□□ -2.56
VCANP13611 AL359314.1-201ENST00000616913 261 ntBASIC-0.91□□□□□ -2.56
VCANP13611 AC018755.4-201ENST00000619715 454 ntBASIC-0.91□□□□□ -2.56
VCANP13611 MIR7157-201ENST00000635801 60 ntBASIC-0.91□□□□□ -2.56
VCANP13611 MT-TY-201ENST00000387409 66 ntBASIC-0.91□□□□□ -2.56
VCANP13611 RPS24P7-201ENST00000416921 246 ntBASIC-0.91□□□□□ -2.56
VCANP13611 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.91□□□□□ -2.56
VCANP13611 AC104689.1-201ENST00000473356 768 ntBASIC-0.91□□□□□ -2.56
VCANP13611 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.91□□□□□ -2.56
VCANP13611 RNA5SP93-201ENST00000362525 114 ntBASIC-0.92□□□□□ -2.56
VCANP13611 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.92□□□□□ -2.56
VCANP13611 MICF-203ENST00000432679 129 ntBASIC-0.92□□□□□ -2.56
VCANP13611 RPS29P27-201ENST00000463711 170 ntBASIC-0.92□□□□□ -2.56
VCANP13611 AC022861.1-201ENST00000522981 663 ntBASIC-0.92□□□□□ -2.56
VCANP13611 AP002906.1-201ENST00000603405 233 ntBASIC-0.92□□□□□ -2.56
VCANP13611 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.92□□□□□ -2.56
VCANP13611 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.92□□□□□ -2.56
VCANP13611 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
VCANP13611 AC016597.2-201ENST00000613256 341 ntBASIC-0.92□□□□□ -2.56
VCANP13611 AC011939.3-201ENST00000613686 466 ntBASIC-0.92□□□□□ -2.56
VCANP13611 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.93□□□□□ -2.56
VCANP13611 MTCYBP34-201ENST00000439552 670 ntBASIC-0.93□□□□□ -2.56
VCANP13611 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.93□□□□□ -2.56
VCANP13611 AL022345.1-201ENST00000607292 135 ntBASIC-0.93□□□□□ -2.56
VCANP13611 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.93□□□□□ -2.56
VCANP13611 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.93□□□□□ -2.56
VCANP13611 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.93□□□□□ -2.56
VCANP13611 MTCO2P34-201ENST00000421994 607 ntBASIC-0.93□□□□□ -2.56
VCANP13611 AC092170.1-201ENST00000440211 356 ntBASIC-0.93□□□□□ -2.56
VCANP13611 HMGB1P28-201ENST00000507778 552 ntBASIC-0.93□□□□□ -2.56
VCANP13611 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.93□□□□□ -2.56
VCANP13611 AC012507.3-201ENST00000603556 477 ntBASIC-0.93□□□□□ -2.56
VCANP13611 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.93□□□□□ -2.56
VCANP13611 RNA5SP240-201ENST00000365355 128 ntBASIC-0.93□□□□□ -2.56
VCANP13611 RNU6-969P-201ENST00000383900 105 ntBASIC-0.93□□□□□ -2.56
VCANP13611 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.93□□□□□ -2.56
VCANP13611 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.93□□□□□ -2.56
VCANP13611 C1DP1-201ENST00000426049 402 ntBASIC-0.93□□□□□ -2.56
VCANP13611 AL365434.2-201ENST00000607979 234 ntBASIC-0.93□□□□□ -2.56
VCANP13611 MIR8063-201ENST00000621930 81 ntBASIC-0.93□□□□□ -2.56
VCANP13611 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AF228730.1-201ENST00000397972 663 ntBASIC-0.94□□□□□ -2.56
VCANP13611 RNA5SP501-201ENST00000410990 112 ntBASIC-0.94□□□□□ -2.56
VCANP13611 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.94□□□□□ -2.56
VCANP13611 AC007215.1-201ENST00000464893 276 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AC005951.2-201ENST00000576282 495 ntBASIC-0.94□□□□□ -2.56
VCANP13611 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AC093422.3-201ENST00000428506 305 ntBASIC-0.94□□□□□ -2.56
VCANP13611 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.94□□□□□ -2.56
VCANP13611 AC010424.1-201ENST00000506336 297 ntBASIC-0.94□□□□□ -2.56
VCANP13611 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.94□□□□□ -2.56
VCANP13611 RNA5SP268-201ENST00000516828 124 ntBASIC-0.94□□□□□ -2.56
VCANP13611 MTND1P15-201ENST00000579262 949 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms