| STAG3L3 | P0CL85 | AC002486.1-201 | ENST00000435098 | 391 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC013470.1-201 | ENST00000453438 | 462 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC104564.1-201 | ENST00000493028 | 407 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC016632.1-201 | ENST00000503994 | 196 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | LINC02220-201 | ENST00000510065 | 270 nt | TSL 5 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MTATP6P9-201 | ENST00000515039 | 680 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-567P-201 | ENST00000516746 | 107 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-1220P-201 | ENST00000517126 | 108 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | TMCO5B-203 | ENST00000529623 | 509 nt | TSL 4 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | PWRN1-203 | ENST00000564898 | 389 nt | TSL 5 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | PWRN1-209 | ENST00000568019 | 359 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC022960.1-201 | ENST00000582269 | 348 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AP000240.1-201 | ENST00000609910 | 452 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC009159.2-201 | ENST00000617603 | 606 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | IGHVIII-44-202 | ENST00000636235 | 289 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC007671.2-201 | ENST00000637344 | 619 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MTND4P23-201 | ENST00000447723 | 1363 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | IL6ST-203 | ENST00000381287 | 8667 nt | TSL 5 BASIC | 1.15 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-715P-201 | ENST00000365204 | 103 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-169P-201 | ENST00000365336 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR483-201 | ENST00000385070 | 76 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RPS29P13-201 | ENST00000402041 | 169 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL358453.1-201 | ENST00000422522 | 250 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL356583.2-201 | ENST00000426536 | 280 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL133396.1-201 | ENST00000432048 | 687 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC007547.1-201 | ENST00000462177 | 490 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC010531.2-201 | ENST00000465012 | 153 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | OR2A41P-201 | ENST00000473586 | 105 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC091212.1-201 | ENST00000474798 | 395 nt | TSL 5 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MTCYBP35-201 | ENST00000503630 | 1137 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-1178P-201 | ENST00000516674 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC103957.1-202 | ENST00000519814 | 735 nt | TSL 3 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC026765.1-201 | ENST00000547876 | 435 nt | TSL 3 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL133279.1-202 | ENST00000556789 | 456 nt | TSL 5 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RBBP8-210 | ENST00000581687 | 617 nt | TSL 2 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC113137.1-201 | ENST00000591869 | 558 nt | TSL 4 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | C8orf59-212 | ENST00000615697 | 483 nt | APPRIS P1 TSL 2 BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR7844-201 | ENST00000616161 | 122 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC106754.1-201 | ENST00000562632 | 1513 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | CYLC1-201 | ENST00000329312 | 2106 nt | APPRIS P3 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU1-76P-201 | ENST00000362903 | 159 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | Y_RNA.132-201 | ENST00000363421 | 102 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR194-1-201 | ENST00000384892 | 85 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL135923.1-201 | ENST00000413066 | 196 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | C5orf58-201 | ENST00000421269 | 406 nt | APPRIS ALT2 TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RPL23AP95-201 | ENST00000426806 | 265 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL356475.1-201 | ENST00000440321 | 341 nt | TSL 5 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC132479.1-201 | ENST00000449160 | 144 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC108043.1-201 | ENST00000512696 | 574 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC090124.1-201 | ENST00000525097 | 448 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | ELOCP32-201 | ENST00000548625 | 324 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | LINC02311-201 | ENST00000556144 | 383 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | CYP4A27P-201 | ENST00000567218 | 190 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC007631.1-201 | ENST00000578545 | 189 nt | TSL 3 BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR4672-201 | ENST00000583126 | 81 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC078795.3-201 | ENST00000602913 | 472 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC091805.2-201 | ENST00000603848 | 235 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL391834.2-201 | ENST00000609982 | 546 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC091304.9-201 | ENST00000612091 | 226 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL133173.2-201 | ENST00000614270 | 90 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-552P-201 | ENST00000362869 | 119 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL356134.1-201 | ENST00000419815 | 373 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL354692.1-201 | ENST00000423044 | 315 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL513185.2-201 | ENST00000425543 | 193 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL121957.1-201 | ENST00000441532 | 338 nt | TSL 2 BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MTND1P18-201 | ENST00000448191 | 573 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL356270.1-201 | ENST00000456587 | 522 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RPS23P5-201 | ENST00000495419 | 428 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC079140.5-201 | ENST00000507882 | 310 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | Vault.3-201 | ENST00000516676 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-856P-201 | ENST00000516959 | 98 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-410P-201 | ENST00000517006 | 107 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AP003461.1-201 | ENST00000528866 | 78 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AL512310.8-201 | ENST00000550183 | 120 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC009145.3-201 | ENST00000567386 | 476 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR4648-201 | ENST00000580107 | 72 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC008751.2-201 | ENST00000597885 | 980 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | MIR8081-201 | ENST00000611533 | 95 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC011155.2-201 | ENST00000623202 | 216 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | AC009033.1-201 | ENST00000624279 | 431 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | KIAA1551-201 | ENST00000312561 | 6230 nt | APPRIS P1 TSL 1 (best) BASIC | 1.12 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | RNU6-378P-201 | ENST00000384324 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| STAG3L3 | P0CL85 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 1.11 | □□□□□ -2.23 | | |