Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AL590632.1-201ENST00000424289 371 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 IFNA20P-201ENST00000436840 528 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND1P03886 AC007969.2-201ENST00000441891 191 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AC009238.1-201ENST00000442165 424 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AL359672.1-201ENST00000442302 409 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AC009237.6-201ENST00000446969 424 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 RNU6-329P-201ENST00000459618 107 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.1□□□□□ -2.07
MT-ND1P03886 AC025465.4-201ENST00000513422 638 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AC026464.5-201ENST00000562497 722 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 MIR3126-201ENST00000577443 74 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND1P03886 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
MT-ND1P03886 MIR3529-201ENST00000637713 78 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND1P03886 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
MT-ND1P03886 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.1□□□□□ -2.07
MT-ND1P03886 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MT-ND1P03886 AL365361.1-201ENST00000566942 3481 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 Y_RNA.212-201ENST00000364177 102 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 RPS29P13-201ENST00000402041 169 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.09□□□□□ -2.07
MT-ND1P03886 AC243964.1-201ENST00000441814 261 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 PMCHL2-203ENST00000457791 237 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.09□□□□□ -2.07
MT-ND1P03886 TRBVA-201ENST00000498804 316 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 HMGN1P12-201ENST00000499125 195 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 RNU6-273P-201ENST00000516937 96 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 RN7SKP256-201ENST00000517201 314 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.09□□□□□ -2.07
MT-ND1P03886 MIR4742-201ENST00000581069 85 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 AC011712.1-201ENST00000588959 234 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 BNIP3P22-201ENST00000593399 556 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 AC009033.1-201ENST00000624279 431 ntBASIC2.09□□□□□ -2.07
MT-ND1P03886 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
MT-ND1P03886 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.09□□□□□ -2.08
MT-ND1P03886 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
MT-ND1P03886 CBX3P1-201ENST00000325243 554 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 RNU6-527P-201ENST00000363425 104 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 Y_RNA.135-201ENST00000363439 95 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MT-ND1P03886 RNU6-692P-201ENST00000384496 107 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AL445529.1-201ENST00000398713 389 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AL355497.1-201ENST00000406262 551 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 RNU6-293P-201ENST00000411259 106 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC009161.1-201ENST00000417306 376 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC138623.1-201ENST00000418060 216 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 RPL21P111-201ENST00000418453 477 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 PDCL2P1-201ENST00000419302 352 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND1P03886 MTCO3P46-201ENST00000425787 232 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.08□□□□□ -2.08
MT-ND1P03886 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND1P03886 MTND1P11-201ENST00000456661 876 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AMD1P1-201ENST00000457220 922 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AC109479.2-201ENST00000517842 174 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND1P03886 AC100830.2-201ENST00000581636 240 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 AC023043.2-201ENST00000589678 1026 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.08□□□□□ -2.08
MT-ND1P03886 CTSLP2-204ENST00000629029 392 ntBASIC2.08□□□□□ -2.08
MT-ND1P03886 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND1P03886 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND1P03886 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MT-ND1P03886 HAUS6P2-201ENST00000433254 2404 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-845P-201ENST00000362578 103 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 Y_RNA.72-201ENST00000362894 103 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-529P-201ENST00000363383 104 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-525P-201ENST00000363685 104 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 SNORD116-11-201ENST00000383882 92 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-767P-201ENST00000384132 107 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-301P-201ENST00000384277 107 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 RNU6-95P-201ENST00000384697 107 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 MIR561-201ENST00000385216 97 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND1P03886 MTND3P8-201ENST00000412909 339 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
MT-ND1P03886 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AL365400.1-201ENST00000431854 640 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 MTCO2P3-201ENST00000442543 421 ntBASIC2.07□□□□□ -2.08
MT-ND1P03886 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.07□□□□□ -2.08
MT-ND1P03886 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms