Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.03□□□□□ -2.41
SPTA1P02549 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.03□□□□□ -2.41
SPTA1P02549 AC107075.1-201ENST00000613695 314 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 MIR4315-1-201ENST00000636800 73 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 MIR4315-2-201ENST00000640925 73 ntBASIC-0.03□□□□□ -2.41
SPTA1P02549 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 RNU6-514P-201ENST00000384208 107 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPTA1P02549 AL160314.1-201ENST00000490836 438 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AC022616.8-201ENST00000533569 253 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 MIR3681-201ENST00000580089 72 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPTA1P02549 RPL30P11-203ENST00000598995 310 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AL592221.1-201ENST00000605266 382 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AC008993.2-201ENST00000631744 806 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 SNORD114-24-201ENST00000365029 72 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPTA1P02549 MTCO3P18-201ENST00000440206 761 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPTA1P02549 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.04□□□□□ -2.42
SPTA1P02549 MTCO3P7-201ENST00000510008 774 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 MTCYBP43-201ENST00000513621 740 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 SNORD79.1-201ENST00000516069 84 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.04□□□□□ -2.42
SPTA1P02549 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.04□□□□□ -2.42
SPTA1P02549 MIR3169-201ENST00000578032 83 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 BNIP3P24-201ENST00000593398 557 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 AC008759.3-201ENST00000613300 508 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 MTND5P32-201ENST00000560711 1802 ntBASIC-0.04□□□□□ -2.42
SPTA1P02549 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
SPTA1P02549 RNU6-619P-201ENST00000365146 108 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 ARL5AP1-201ENST00000418991 388 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 PTGES3P4-201ENST00000426243 356 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC092685.1-201ENST00000447960 1243 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RNU6-333P-201ENST00000459117 107 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RNU6-840P-201ENST00000517275 65 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPTA1P02549 MIR1248-201ENST00000629190 106 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SPTA1P02549 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
SPTA1P02549 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 SNORD115-41-201ENST00000363608 82 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 AF228730.1-201ENST00000397972 663 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RNA5SP451-201ENST00000410588 110 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RPS3AP1-201ENST00000413190 320 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RAC1P6-201ENST00000423911 575 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 C8orf59P1-201ENST00000429930 303 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC010153.1-201ENST00000432862 727 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 AC002381.1-201ENST00000447049 280 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 SNORD126-201ENST00000459475 77 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 RNU6-390P-201ENST00000516259 103 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.05□□□□□ -2.42
SPTA1P02549 IGJP1-201ENST00000522682 475 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AC017083.3-201ENST00000609955 700 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 MTND1P37-201ENST00000636562 264 ntBASIC-0.05□□□□□ -2.42
SPTA1P02549 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SPTA1P02549 AL390237.1-201ENST00000404226 1415 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
SPTA1P02549 MIR548B-201ENST00000385247 97 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 RNU6-754P-201ENST00000391166 107 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL133264.1-201ENST00000407157 562 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AL357139.1-201ENST00000407792 426 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 HMGN2P34-201ENST00000437647 269 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 USP9YP22-201ENST00000438971 294 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 MTATP6P30-201ENST00000443540 664 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 RPL7P55-201ENST00000450522 746 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 RN7SKP287-201ENST00000516546 266 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AL158211.4-201ENST00000606988 584 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC084824.4-201ENST00000620106 731 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 CASC19-280ENST00000642102 1351 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 RNU6-793P-201ENST00000384233 104 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 MIR186-201ENST00000384988 86 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 SNORA75.2-201ENST00000391138 150 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 SNORA75.3-201ENST00000391231 150 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 COX6CP10-201ENST00000416832 224 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 MTCO2P12-201ENST00000427426 682 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.06□□□□□ -2.42
SPTA1P02549 AC005345.1-201ENST00000431868 217 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 TIMM9P1-201ENST00000436122 256 ntBASIC-0.06□□□□□ -2.42
SPTA1P02549 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms