Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 Y_RNA.222-201ENST00000364264 102 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 RNU6-1303P-201ENST00000364841 107 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 Y_RNA.307-201ENST00000365022 117 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 RNU6-715P-201ENST00000365204 103 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 SNORA67.3-201ENST00000384366 140 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 RNU6-393P-201ENST00000384475 107 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 Y_RNA.574-201ENST00000384766 95 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 MT-TC-201ENST00000387405 66 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 SAR1AP2-201ENST00000392696 594 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL2A1P02458 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
COL2A1P02458 HMGB1P12-201ENST00000438594 598 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 DYNLT3P2-201ENST00000442517 295 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 RNU6-264P-201ENST00000517134 104 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.47□□□□□ -2.01
COL2A1P02458 CR383656.7-201ENST00000548164 174 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 AC026470.2-201ENST00000561492 181 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.47□□□□□ -2.01
COL2A1P02458 AC113195.1-201ENST00000579952 141 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 AC005357.1-201ENST00000588399 301 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 AP000787.2-201ENST00000604432 568 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 MIR6864-201ENST00000617935 70 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.47□□□□□ -2.01
COL2A1P02458 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
COL2A1P02458 RNU6-960P-201ENST00000364056 120 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.46□□□□□ -2.02
COL2A1P02458 RNU6-637P-201ENST00000384050 107 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 Y_RNA.455-201ENST00000384230 98 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
COL2A1P02458 AC099677.1-201ENST00000420575 175 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 CECR9-201ENST00000453421 199 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AC234775.1-201ENST00000454247 670 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AL353752.1-201ENST00000454946 260 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 RPL37P6-202ENST00000464216 403 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AC104564.1-201ENST00000493028 407 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.46□□□□□ -2.02
COL2A1P02458 AC092436.3-201ENST00000511788 257 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 Y_RNA.708-201ENST00000516950 96 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 RNU1-54P-201ENST00000517181 120 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 Y_RNA.721-201ENST00000517207 102 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.46□□□□□ -2.02
COL2A1P02458 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL2A1P02458 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.46□□□□□ -2.02
COL2A1P02458 AC018462.2-201ENST00000605375 395 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AL359198.2-201ENST00000611836 194 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 AC133104.2-201ENST00000615272 193 ntBASIC2.46□□□□□ -2.02
COL2A1P02458 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
COL2A1P02458 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL2A1P02458 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.46□□□□□ -2.02
COL2A1P02458 RNU6-82P-201ENST00000363970 107 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORA23-201ENST00000365128 182 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 Y_RNA.396-201ENST00000383949 103 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU6-95P-201ENST00000384697 107 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU6-1140P-201ENST00000410517 106 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU4-46P-201ENST00000410818 138 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SSXP9-201ENST00000417503 292 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 PSMA2P3-201ENST00000429685 675 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.45□□□□□ -2.02
COL2A1P02458 HMGB1P9-201ENST00000429856 646 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.45□□□□□ -2.02
COL2A1P02458 RNU7-187P-201ENST00000458985 68 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORD108-201ENST00000459332 71 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU7-169P-201ENST00000459456 61 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC015911.1-201ENST00000495111 156 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC114801.2-201ENST00000503825 781 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC105758.1-201ENST00000506038 399 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU6-1143P-201ENST00000516125 104 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU6-1016P-201ENST00000516689 94 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC104576.1-201ENST00000524225 88 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC026371.1-201ENST00000551867 419 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 HSBP1P1-201ENST00000555205 166 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.45□□□□□ -2.02
COL2A1P02458 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.45□□□□□ -2.02
COL2A1P02458 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.45□□□□□ -2.02
COL2A1P02458 AL356575.1-201ENST00000603008 283 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC012669.1-201ENST00000603209 283 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL031176.1-201ENST00000604554 466 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORD58B-201ENST00000607313 66 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 U2.17-201ENST00000611454 95 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL2A1P02458 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL2A1P02458 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL2A1P02458 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL2A1P02458 AC005592.1-201ENST00000566527 1640 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 Y_RNA.26-201ENST00000362539 101 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 Y_RNA.428-201ENST00000384078 102 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORD73A-201ENST00000386062 65 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU2-37P-201ENST00000410695 177 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC243428.1-201ENST00000421099 264 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.45□□□□□ -2.02
COL2A1P02458 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.45□□□□□ -2.02
COL2A1P02458 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 NDUFB4P6-201ENST00000436819 366 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.45□□□□□ -2.02
COL2A1P02458 HMGB3P30-201ENST00000457863 606 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORD97-201ENST00000459187 142 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms