Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPL39P5-202ENST00000512505 151 ntBASIC2.66□□□□□ -1.98
LDLRP01130 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
LDLRP01130 RN7SKP295-201ENST00000517264 153 ntBASIC2.66□□□□□ -1.98
LDLRP01130 RNU6-988P-201ENST00000519081 107 ntBASIC2.66□□□□□ -1.98
LDLRP01130 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MTCO3P23-201ENST00000561363 289 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR5690-201ENST00000583739 73 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR4769-201ENST00000584126 77 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR5692C1-201ENST00000585309 91 ntBASIC2.66□□□□□ -1.98
LDLRP01130 VN1R107P-201ENST00000601784 209 ntBASIC2.66□□□□□ -1.98
LDLRP01130 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
LDLRP01130 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
LDLRP01130 UCA1.1-201ENST00000620952 75 ntBASIC2.66□□□□□ -1.98
LDLRP01130 AL669831.3-213ENST00000636676 183 ntBASIC2.66□□□□□ -1.98
LDLRP01130 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
LDLRP01130 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LDLRP01130 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
LDLRP01130 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
LDLRP01130 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.98
LDLRP01130 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.98
LDLRP01130 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.65□□□□□ -1.99
LDLRP01130 AC010889.1-201ENST00000566193 2666 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-37P-201ENST00000362692 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-11P-201ENST00000364234 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-25P-201ENST00000383873 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-1-201ENST00000383898 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-48P-201ENST00000384161 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-36P-201ENST00000384172 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-4P-201ENST00000384205 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-5P-201ENST00000384238 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-72P-201ENST00000384285 79 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-3P-201ENST00000384314 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-196P-201ENST00000384315 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 Y_RNA.473-201ENST00000384333 102 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-16P-201ENST00000384385 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-15P-201ENST00000384534 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-601P-201ENST00000384540 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-2-201ENST00000384627 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-29P-201ENST00000384637 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-9-201ENST00000384776 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-33P-201ENST00000384793 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RPLP0P7-201ENST00000416050 667 ntBASIC2.65□□□□□ -1.99
LDLRP01130 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
LDLRP01130 AC087499.2-201ENST00000432861 149 ntBASIC2.65□□□□□ -1.99
LDLRP01130 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.65□□□□□ -1.99
LDLRP01130 AL161651.1-201ENST00000440882 223 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC009296.1-201ENST00000443146 155 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AL035666.1-201ENST00000446195 348 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.65□□□□□ -1.99
LDLRP01130 AP000705.1-201ENST00000454567 350 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.65□□□□□ -1.99
LDLRP01130 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC117503.1-201ENST00000472241 394 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC026801.1-201ENST00000497178 464 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.65□□□□□ -1.99
LDLRP01130 AC116655.1-201ENST00000508324 901 ntBASIC2.65□□□□□ -1.99
LDLRP01130 SNORA14.1-201ENST00000516113 141 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-1069P-201ENST00000516612 133 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.65□□□□□ -1.99
LDLRP01130 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.65□□□□□ -1.99
LDLRP01130 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.65□□□□□ -1.99
LDLRP01130 MIR4524B-201ENST00000581569 115 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC006006.1-201ENST00000603082 144 ntBASIC2.65□□□□□ -1.99
LDLRP01130 RNU6-6P-201ENST00000606623 107 ntBASIC2.65□□□□□ -1.99
LDLRP01130 AC087588.2-201ENST00000617667 426 ntBASIC2.65□□□□□ -1.99
LDLRP01130 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.65□□□□□ -1.99
LDLRP01130 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LDLRP01130 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.99
LDLRP01130 KPNA2P1-201ENST00000458289 1591 ntBASIC2.65□□□□□ -1.99
LDLRP01130 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LDLRP01130 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.65□□□□□ -1.99
LDLRP01130 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC138393.1-203ENST00000327086 343 ntBASIC2.64□□□□□ -1.99
LDLRP01130 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
LDLRP01130 RNU6-858P-201ENST00000362436 107 ntBASIC2.64□□□□□ -1.99
LDLRP01130 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LDLRP01130 Y_RNA.404-201ENST00000383978 102 ntBASIC2.64□□□□□ -1.99
LDLRP01130 RNU6-1032P-201ENST00000384100 107 ntBASIC2.64□□□□□ -1.99
LDLRP01130 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
LDLRP01130 RNU6-1106P-201ENST00000390845 107 ntBASIC2.64□□□□□ -1.99
LDLRP01130 RNU6-750P-201ENST00000390946 107 ntBASIC2.64□□□□□ -1.99
LDLRP01130 U3.37-201ENST00000408528 213 ntBASIC2.64□□□□□ -1.99
LDLRP01130 RNU6-985P-201ENST00000410182 104 ntBASIC2.64□□□□□ -1.99
LDLRP01130 MCFD2P1-201ENST00000417812 300 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AL139396.1-201ENST00000421137 167 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AL590632.1-201ENST00000424289 371 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.64□□□□□ -1.99
LDLRP01130 AC108059.2-201ENST00000434626 151 ntBASIC2.64□□□□□ -1.99
LDLRP01130 HIGD1AP2-201ENST00000446367 280 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.64□□□□□ -1.99
LDLRP01130 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.64□□□□□ -1.99
LDLRP01130 MTATP8P1-201ENST00000467115 207 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
LDLRP01130 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.64□□□□□ -1.99
LDLRP01130 AC097473.1-201ENST00000508142 408 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms