Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR5692A1-201ENST00000580523 69 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AC105148.1-201ENST00000604961 409 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AL158050.2-201ENST00000605336 568 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AC018889.1-201ENST00000605372 397 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AL590240.4-201ENST00000616908 390 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
SHOX2O60902 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHOX2O60902 ZNF209P-201ENST00000593450 2304 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 RNU6-78P-201ENST00000362897 107 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 RNU1-22P-201ENST00000363334 158 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 Y_RNA.332-201ENST00000365271 113 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 RNU6-1242P-201ENST00000391052 103 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 MIR1267-201ENST00000408723 78 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.17□□□□□ -2.22
SHOX2O60902 AL591043.1-201ENST00000432461 424 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 CR769776.1-201ENST00000441254 787 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 SNRPFP3-201ENST00000457792 225 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.17□□□□□ -2.22
SHOX2O60902 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 MTCO3P9-201ENST00000506989 781 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 LRRC34P2-201ENST00000514850 553 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 RNU6-123P-201ENST00000516163 102 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.17□□□□□ -2.22
SHOX2O60902 AL590095.2-201ENST00000604136 117 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 AL359999.1-201ENST00000604513 294 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 AP002782.1-201ENST00000623107 614 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 AP000560.1-201ENST00000624150 1937 ntBASIC1.17□□□□□ -2.22
SHOX2O60902 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SHOX2O60902 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 RNU5E-7P-201ENST00000365290 117 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 RNU6-809P-201ENST00000384461 107 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AL031779.1-201ENST00000415663 330 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 MTND1P20-201ENST00000430341 950 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AC119618.1-201ENST00000434191 222 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 GDI2P2-201ENST00000445131 608 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AL360271.2-201ENST00000447710 161 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 MTATP6P14-201ENST00000455189 673 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AL122001.1-201ENST00000457027 370 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AC130509.1-201ENST00000464158 433 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AC022447.4-201ENST00000504053 364 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AC005741.1-201ENST00000511094 432 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
SHOX2O60902 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.16□□□□□ -2.22
SHOX2O60902 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 RMST_4.1-201ENST00000616886 107 ntBASIC1.16□□□□□ -2.22
SHOX2O60902 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.16□□□□□ -2.22
SHOX2O60902 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
SHOX2O60902 RNU6-112P-201ENST00000363599 104 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 Y_RNA.167-201ENST00000363735 109 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 RNU6-906P-201ENST00000384700 70 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.15□□□□□ -2.23
SHOX2O60902 AL589872.1-201ENST00000426602 288 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 MED13P1-201ENST00000428342 171 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.15□□□□□ -2.23
SHOX2O60902 RPS24P1-201ENST00000438550 371 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 MTND2P4-201ENST00000445034 1004 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
SHOX2O60902 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SHOX2O60902 AC117522.1-201ENST00000509821 380 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 RNU5F-2P-201ENST00000516066 82 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 MTND4LP18-201ENST00000526864 291 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.15□□□□□ -2.23
SHOX2O60902 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.15□□□□□ -2.23
SHOX2O60902 ZNF519P3-201ENST00000557158 1032 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.15□□□□□ -2.23
SHOX2O60902 AC083806.3-201ENST00000614016 455 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AL109933.3-201ENST00000619095 188 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AL121890.5-201ENST00000620848 304 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AP002371.2-201ENST00000624450 503 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 MTND4P12-201ENST00000498999 1377 ntBASIC1.15□□□□□ -2.23
SHOX2O60902 AL442644.1-201ENST00000454390 3105 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 MTND5P9-201ENST00000503854 1755 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 SNORD33-201ENST00000362761 85 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 RNU6-271P-201ENST00000363858 105 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 SNORD114-6-201ENST00000364393 72 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 SNORD32B-201ENST00000364460 84 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 Y_RNA.303-201ENST00000364998 94 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 RNU6-83P-201ENST00000384568 112 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AL355143.1-201ENST00000407101 841 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 RNU6-387P-201ENST00000411331 105 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC139712.2-201ENST00000424302 339 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.14□□□□□ -2.23
SHOX2O60902 DUXAP8-207ENST00000456786 622 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SHOX2O60902 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.14□□□□□ -2.23
SHOX2O60902 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.14□□□□□ -2.23
SHOX2O60902 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.14□□□□□ -2.23
SHOX2O60902 AC087588.2-201ENST00000617667 426 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms