Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 MFSD8-216ENST00000641147 4009 ntBASIC3.54□□□□□ -1.84
SHOXO15266 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOXO15266 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOXO15266 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHOXO15266 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SHOXO15266 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.53□□□□□ -1.84
SHOXO15266 Y_RNA.418-201ENST00000384029 102 ntBASIC3.53□□□□□ -1.84
SHOXO15266 SNORA70F-201ENST00000384142 135 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU6-1289P-201ENST00000384431 106 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNA5SP252-201ENST00000391131 119 ntBASIC3.53□□□□□ -1.84
SHOXO15266 SNORA11-201ENST00000408789 128 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RPL19P1-201ENST00000411635 428 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RPL7AP25-201ENST00000423357 805 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AC011998.1-201ENST00000433403 117 ntBASIC3.53□□□□□ -1.84
SHOXO15266 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.53□□□□□ -1.84
SHOXO15266 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.53□□□□□ -1.84
SHOXO15266 RPL21P126-201ENST00000470049 478 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU6-155P-201ENST00000516347 100 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU6-789P-201ENST00000517105 102 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AP005660.1-201ENST00000522972 293 ntBASIC3.53□□□□□ -1.84
SHOXO15266 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.53□□□□□ -1.84
SHOXO15266 AC006380.1-201ENST00000603598 186 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AC072026.1-201ENST00000605023 201 ntBASIC3.53□□□□□ -1.84
SHOXO15266 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AC099778.2-201ENST00000610904 211 ntBASIC3.53□□□□□ -1.84
SHOXO15266 PCGEM1.1-201ENST00000613431 131 ntBASIC3.53□□□□□ -1.84
SHOXO15266 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AC005562.2-201ENST00000618264 111 ntBASIC3.53□□□□□ -1.84
SHOXO15266 MIR3674-201ENST00000636576 68 ntBASIC3.53□□□□□ -1.84
SHOXO15266 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.53□□□□□ -1.84
SHOXO15266 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
SHOXO15266 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
SHOXO15266 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.53□□□□□ -1.84
SHOXO15266 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SHOXO15266 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHOXO15266 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
SHOXO15266 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.53□□□□□ -1.85
SHOXO15266 AC135776.4-201ENST00000624300 1904 ntBASIC3.52□□□□□ -1.85
SHOXO15266 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHOXO15266 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.52□□□□□ -1.85
SHOXO15266 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHOXO15266 RNU6-529P-201ENST00000363383 104 ntBASIC3.52□□□□□ -1.85
SHOXO15266 RNU1-57P-201ENST00000384491 166 ntBASIC3.52□□□□□ -1.85
SHOXO15266 SNORA37-201ENST00000384504 129 ntBASIC3.52□□□□□ -1.85
SHOXO15266 MIR186-201ENST00000384988 86 ntBASIC3.52□□□□□ -1.85
SHOXO15266 MIR3065-201ENST00000390137 79 ntBASIC3.52□□□□□ -1.85
SHOXO15266 MIR767-201ENST00000390228 109 ntBASIC3.52□□□□□ -1.85
SHOXO15266 AC073264.2-201ENST00000448886 166 ntBASIC3.52□□□□□ -1.85
SHOXO15266 RPL23AP3-201ENST00000453844 468 ntBASIC3.52□□□□□ -1.85
SHOXO15266 RPS3P1-201ENST00000456781 192 ntBASIC3.52□□□□□ -1.85
SHOXO15266 AP001324.2-201ENST00000461163 319 ntBASIC3.52□□□□□ -1.85
SHOXO15266 RPL35AP15-201ENST00000468042 339 ntBASIC3.52□□□□□ -1.85
SHOXO15266 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.52□□□□□ -1.85
SHOXO15266 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.52□□□□□ -1.85
SHOXO15266 SNORD116-28-201ENST00000516123 91 ntBASIC3.52□□□□□ -1.85
SHOXO15266 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.52□□□□□ -1.85
SHOXO15266 IPO5P1-202ENST00000600039 287 ntBASIC3.52□□□□□ -1.85
SHOXO15266 SNORD11B-201ENST00000607707 90 ntBASIC3.52□□□□□ -1.85
SHOXO15266 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHOXO15266 AC004467.1-201ENST00000615678 330 ntBASIC3.52□□□□□ -1.85
SHOXO15266 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHOXO15266 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SHOXO15266 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.52□□□□□ -1.85
SHOXO15266 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHOXO15266 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOXO15266 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOXO15266 Y_RNA.40-201ENST00000362645 93 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNU6-727P-201ENST00000363592 107 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNA5SP175-201ENST00000364275 119 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNU6-1264P-201ENST00000383891 107 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNU6-662P-201ENST00000384253 104 ntBASIC3.51□□□□□ -1.85
SHOXO15266 SNORA40.19-201ENST00000390846 128 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNU2-54P-201ENST00000410299 190 ntBASIC3.51□□□□□ -1.85
SHOXO15266 ELOCP21-201ENST00000412558 336 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AL590139.1-201ENST00000416267 400 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AIMP1P2-201ENST00000425294 312 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC024067.1-201ENST00000426199 223 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOXO15266 RPL23AP52-201ENST00000439311 478 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RNU6-344P-201ENST00000516635 111 ntBASIC3.51□□□□□ -1.85
SHOXO15266 IGKV2-38-201ENST00000517443 247 ntBASIC3.51□□□□□ -1.85
SHOXO15266 GNRHR2P1-201ENST00000555315 631 ntBASIC3.51□□□□□ -1.85
SHOXO15266 RPL21P9-201ENST00000556149 474 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOXO15266 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.51□□□□□ -1.85
SHOXO15266 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.51□□□□□ -1.85
SHOXO15266 AC011471.1-201ENST00000585766 187 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC079587.1-201ENST00000603846 277 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AL137843.1-201ENST00000605078 385 ntBASIC3.51□□□□□ -1.85
SHOXO15266 TCL6_2.1-201ENST00000615162 119 ntBASIC3.51□□□□□ -1.85
SHOXO15266 AC091932.3-201ENST00000624223 323 ntBASIC3.51□□□□□ -1.85
SHOXO15266 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOXO15266 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHOXO15266 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.51□□□□□ -1.85
SHOXO15266 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms