Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.39□□□□□ -2.03
TO15178 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TO15178 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TO15178 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
TO15178 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
TO15178 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TO15178 RNU6-845P-201ENST00000362578 103 ntBASIC2.38□□□□□ -2.03
TO15178 RNU6-1285P-201ENST00000363480 105 ntBASIC2.38□□□□□ -2.03
TO15178 SNORD32A-201ENST00000364805 84 ntBASIC2.38□□□□□ -2.03
TO15178 Y_RNA.390-201ENST00000383932 102 ntBASIC2.38□□□□□ -2.03
TO15178 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
TO15178 CBX3P9-201ENST00000402326 552 ntBASIC2.38□□□□□ -2.03
TO15178 AL590632.1-201ENST00000424289 371 ntBASIC2.38□□□□□ -2.03
TO15178 ARL5AP4-201ENST00000430731 512 ntBASIC2.38□□□□□ -2.03
TO15178 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.38□□□□□ -2.03
TO15178 PMCHL2-203ENST00000457791 237 ntBASIC2.38□□□□□ -2.03
TO15178 AL121594.1-201ENST00000475906 575 ntBASIC2.38□□□□□ -2.03
TO15178 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.38□□□□□ -2.03
TO15178 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
TO15178 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.38□□□□□ -2.03
TO15178 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.38□□□□□ -2.03
TO15178 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.38□□□□□ -2.03
TO15178 MYL12BP1-201ENST00000569826 507 ntBASIC2.38□□□□□ -2.03
TO15178 AC009127.3-201ENST00000570531 403 ntBASIC2.38□□□□□ -2.03
TO15178 CPDP1-201ENST00000579660 283 ntBASIC2.38□□□□□ -2.03
TO15178 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.38□□□□□ -2.03
TO15178 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
TO15178 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.38□□□□□ -2.03
TO15178 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.38□□□□□ -2.03
TO15178 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TO15178 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
TO15178 AP000560.1-201ENST00000624150 1937 ntBASIC2.38□□□□□ -2.03
TO15178 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TO15178 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
TO15178 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TO15178 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
TO15178 SNORD62.1-201ENST00000362541 86 ntBASIC2.37□□□□□ -2.03
TO15178 Y_RNA.40-201ENST00000362645 93 ntBASIC2.37□□□□□ -2.03
TO15178 U3.13-201ENST00000364804 214 ntBASIC2.37□□□□□ -2.03
TO15178 RN7SKP61-201ENST00000410642 295 ntBASIC2.37□□□□□ -2.03
TO15178 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.37□□□□□ -2.03
TO15178 AIMP1P2-201ENST00000425294 312 ntBASIC2.37□□□□□ -2.03
TO15178 RPL23AP95-201ENST00000426806 265 ntBASIC2.37□□□□□ -2.03
TO15178 AC078809.1-201ENST00000427601 140 ntBASIC2.37□□□□□ -2.03
TO15178 AC244670.1-201ENST00000436879 112 ntBASIC2.37□□□□□ -2.03
TO15178 AC098614.3-201ENST00000438957 440 ntBASIC2.37□□□□□ -2.03
TO15178 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.37□□□□□ -2.03
TO15178 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.37□□□□□ -2.03
TO15178 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TO15178 PCMTD1P1-201ENST00000455560 355 ntBASIC2.37□□□□□ -2.03
TO15178 MTND1P11-201ENST00000456661 876 ntBASIC2.37□□□□□ -2.03
TO15178 CYP2C59P-201ENST00000457790 269 ntBASIC2.37□□□□□ -2.03
TO15178 RNU7-187P-201ENST00000458985 68 ntBASIC2.37□□□□□ -2.03
TO15178 AC022447.4-201ENST00000504053 364 ntBASIC2.37□□□□□ -2.03
TO15178 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
TO15178 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.37□□□□□ -2.03
TO15178 HSPE1P4-201ENST00000550617 308 ntBASIC2.37□□□□□ -2.03
TO15178 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.37□□□□□ -2.03
TO15178 AC005668.1-201ENST00000571142 476 ntBASIC2.37□□□□□ -2.03
TO15178 RPS3AP23-202ENST00000574601 686 ntBASIC2.37□□□□□ -2.03
TO15178 MIR3162-201ENST00000581818 82 ntBASIC2.37□□□□□ -2.03
TO15178 AC018889.1-201ENST00000605372 397 ntBASIC2.37□□□□□ -2.03
TO15178 AC022306.2-201ENST00000617563 647 ntBASIC2.37□□□□□ -2.03
TO15178 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TO15178 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TO15178 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TO15178 Y_RNA.166-201ENST00000363730 102 ntBASIC2.36□□□□□ -2.03
TO15178 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
TO15178 RNA5SP125-201ENST00000364843 120 ntBASIC2.36□□□□□ -2.03
TO15178 RNA5SP240-201ENST00000365355 128 ntBASIC2.36□□□□□ -2.03
TO15178 RNU6-790P-201ENST00000384479 105 ntBASIC2.36□□□□□ -2.03
TO15178 Y_RNA.510-201ENST00000384511 114 ntBASIC2.36□□□□□ -2.03
TO15178 MIR27B-201ENST00000385129 97 ntBASIC2.36□□□□□ -2.03
TO15178 MIR634-201ENST00000385208 97 ntBASIC2.36□□□□□ -2.03
TO15178 RNU2-63P-201ENST00000410792 194 ntBASIC2.36□□□□□ -2.03
TO15178 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.36□□□□□ -2.03
TO15178 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.36□□□□□ -2.03
TO15178 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.36□□□□□ -2.03
TO15178 AL133396.1-201ENST00000432048 687 ntBASIC2.36□□□□□ -2.03
TO15178 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.36□□□□□ -2.03
TO15178 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.36□□□□□ -2.03
TO15178 CKS1BP2-201ENST00000497342 240 ntBASIC2.36□□□□□ -2.03
TO15178 AC016632.1-201ENST00000503994 196 ntBASIC2.36□□□□□ -2.03
TO15178 Y_RNA.682-201ENST00000516457 100 ntBASIC2.36□□□□□ -2.03
TO15178 RNU7-30P-201ENST00000516835 62 ntBASIC2.36□□□□□ -2.03
TO15178 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
TO15178 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.36□□□□□ -2.03
TO15178 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.36□□□□□ -2.03
TO15178 MIR4790-201ENST00000577799 79 ntBASIC2.36□□□□□ -2.03
TO15178 AL670379.2-201ENST00000604983 252 ntBASIC2.36□□□□□ -2.03
TO15178 AL133215.3-201ENST00000609801 448 ntBASIC2.36□□□□□ -2.03
TO15178 MIR8076-201ENST00000611401 83 ntBASIC2.36□□□□□ -2.03
TO15178 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
TO15178 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TO15178 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TO15178 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.35□□□□□ -2.03
TO15178 AC092268.1-201ENST00000342691 405 ntBASIC2.35□□□□□ -2.03
TO15178 RNU1-72P-201ENST00000362976 153 ntBASIC2.35□□□□□ -2.03
TO15178 Y_RNA.151-201ENST00000363566 112 ntBASIC2.35□□□□□ -2.03
TO15178 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms