Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.13□□□□□ -2.07
CUX2O14529 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.13□□□□□ -2.07
CUX2O14529 AP002453.2-201ENST00000533503 320 ntBASIC2.13□□□□□ -2.07
CUX2O14529 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.13□□□□□ -2.07
CUX2O14529 RPL30P11-203ENST00000598995 310 ntBASIC2.13□□□□□ -2.07
CUX2O14529 AC245014.2-201ENST00000603689 287 ntBASIC2.13□□□□□ -2.07
CUX2O14529 AC246785.4-201ENST00000605374 287 ntBASIC2.13□□□□□ -2.07
CUX2O14529 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.13□□□□□ -2.07
CUX2O14529 AC245884.12-201ENST00000615364 59 ntBASIC2.13□□□□□ -2.07
CUX2O14529 AC078883.4-201ENST00000623218 367 ntBASIC2.13□□□□□ -2.07
CUX2O14529 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CUX2O14529 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.12□□□□□ -2.07
CUX2O14529 MIR330-201ENST00000362196 94 ntBASIC2.12□□□□□ -2.07
CUX2O14529 RNU6-1097P-201ENST00000363586 107 ntBASIC2.12□□□□□ -2.07
CUX2O14529 RNA5SP390-201ENST00000410191 113 ntBASIC2.12□□□□□ -2.07
CUX2O14529 PIGFP2-201ENST00000421400 651 ntBASIC2.12□□□□□ -2.07
CUX2O14529 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.12□□□□□ -2.07
CUX2O14529 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.12□□□□□ -2.07
CUX2O14529 AC117503.1-201ENST00000472241 394 ntBASIC2.12□□□□□ -2.07
CUX2O14529 LRRC34P2-201ENST00000514850 553 ntBASIC2.12□□□□□ -2.07
CUX2O14529 RNU6-410P-201ENST00000517006 107 ntBASIC2.12□□□□□ -2.07
CUX2O14529 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.12□□□□□ -2.07
CUX2O14529 AC021646.1-201ENST00000605469 484 ntBASIC2.12□□□□□ -2.07
CUX2O14529 U4atac.1-201ENST00000618345 95 ntBASIC2.12□□□□□ -2.07
CUX2O14529 AC026585.1-201ENST00000619582 524 ntBASIC2.12□□□□□ -2.07
CUX2O14529 AC093648.1-201ENST00000623546 606 ntBASIC2.12□□□□□ -2.07
CUX2O14529 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.12□□□□□ -2.07
CUX2O14529 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CUX2O14529 MTND4P12-201ENST00000498999 1377 ntBASIC2.12□□□□□ -2.07
CUX2O14529 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.12□□□□□ -2.07
CUX2O14529 SNORD3E-201ENST00000362899 217 ntBASIC2.11□□□□□ -2.07
CUX2O14529 RNU6-529P-201ENST00000363383 104 ntBASIC2.11□□□□□ -2.07
CUX2O14529 RNU6-716P-201ENST00000365621 103 ntBASIC2.11□□□□□ -2.07
CUX2O14529 RAP1BP3-201ENST00000407180 549 ntBASIC2.11□□□□□ -2.07
CUX2O14529 SNRPEP10-201ENST00000420249 274 ntBASIC2.11□□□□□ -2.07
CUX2O14529 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.11□□□□□ -2.07
CUX2O14529 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.11□□□□□ -2.07
CUX2O14529 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.11□□□□□ -2.07
CUX2O14529 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.11□□□□□ -2.07
CUX2O14529 RNA5SP384-201ENST00000516615 116 ntBASIC2.11□□□□□ -2.07
CUX2O14529 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.11□□□□□ -2.07
CUX2O14529 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CUX2O14529 AC072046.2-201ENST00000618366 268 ntBASIC2.11□□□□□ -2.07
CUX2O14529 AC007792.1-201ENST00000623023 402 ntBASIC2.11□□□□□ -2.07
CUX2O14529 AC010487.4-201ENST00000637027 61 ntBASIC2.11□□□□□ -2.07
CUX2O14529 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.1□□□□□ -2.07
CUX2O14529 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CUX2O14529 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
CUX2O14529 Y_RNA.471-201ENST00000384312 102 ntBASIC2.1□□□□□ -2.07
CUX2O14529 OR6C66P-201ENST00000414917 930 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.1□□□□□ -2.07
CUX2O14529 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.1□□□□□ -2.07
CUX2O14529 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.1□□□□□ -2.07
CUX2O14529 RNU7-182P-201ENST00000459009 62 ntBASIC2.1□□□□□ -2.07
CUX2O14529 KLF3P2-201ENST00000465138 268 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC087343.1-201ENST00000477341 475 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC074344.1-201ENST00000512823 224 ntBASIC2.1□□□□□ -2.07
CUX2O14529 RNU2-53P-201ENST00000516257 147 ntBASIC2.1□□□□□ -2.07
CUX2O14529 SNORA18.6-201ENST00000516792 115 ntBASIC2.1□□□□□ -2.07
CUX2O14529 RNU2-44P-201ENST00000516795 194 ntBASIC2.1□□□□□ -2.07
CUX2O14529 MTND3P12-201ENST00000559068 328 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.1□□□□□ -2.07
CUX2O14529 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.1□□□□□ -2.07
CUX2O14529 AC025165.5-201ENST00000602802 578 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC093788.1-201ENST00000609356 927 ntBASIC2.1□□□□□ -2.07
CUX2O14529 MIR8087-201ENST00000612745 78 ntBASIC2.1□□□□□ -2.07
CUX2O14529 AC011155.2-201ENST00000623202 216 ntBASIC2.1□□□□□ -2.07
CUX2O14529 SCARNA4-202ENST00000625402 129 ntBASIC2.1□□□□□ -2.07
CUX2O14529 SEPT14P19-203ENST00000633205 211 ntBASIC2.1□□□□□ -2.07
CUX2O14529 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
CUX2O14529 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CUX2O14529 FGF7P2-201ENST00000332473 296 ntBASIC2.09□□□□□ -2.07
CUX2O14529 RNU1-148P-201ENST00000384472 162 ntBASIC2.09□□□□□ -2.07
CUX2O14529 MIR1-2-201ENST00000384961 85 ntBASIC2.09□□□□□ -2.07
CUX2O14529 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
CUX2O14529 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.09□□□□□ -2.07
CUX2O14529 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.09□□□□□ -2.07
CUX2O14529 MTND3P25-201ENST00000509243 135 ntBASIC2.09□□□□□ -2.07
CUX2O14529 AC091965.2-201ENST00000512324 613 ntBASIC2.09□□□□□ -2.07
CUX2O14529 Y_RNA.687-201ENST00000516558 91 ntBASIC2.09□□□□□ -2.07
CUX2O14529 BNIP3P30-201ENST00000601184 574 ntBASIC2.09□□□□□ -2.07
CUX2O14529 SNORD14A-201ENST00000606526 91 ntBASIC2.09□□□□□ -2.07
CUX2O14529 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.09□□□□□ -2.07
CUX2O14529 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CUX2O14529 RNU6-1010P-201ENST00000362757 107 ntBASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-527P-201ENST00000363425 104 ntBASIC2.08□□□□□ -2.08
CUX2O14529 Y_RNA.201-201ENST00000364052 96 ntBASIC2.08□□□□□ -2.08
CUX2O14529 SNORD14B-201ENST00000364533 90 ntBASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-384P-201ENST00000364900 104 ntBASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-108P-201ENST00000365558 107 ntBASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-456P-201ENST00000384493 107 ntBASIC2.08□□□□□ -2.08
CUX2O14529 MTND3P17-201ENST00000416968 344 ntBASIC2.08□□□□□ -2.08
CUX2O14529 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.08□□□□□ -2.08
CUX2O14529 AL591043.1-201ENST00000432461 424 ntBASIC2.08□□□□□ -2.08
CUX2O14529 MTCO3P5-201ENST00000433620 714 ntBASIC2.08□□□□□ -2.08
CUX2O14529 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.08□□□□□ -2.08
CUX2O14529 AC023790.1-201ENST00000482174 347 ntBASIC2.08□□□□□ -2.08
CUX2O14529 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-685P-201ENST00000517088 95 ntBASIC2.08□□□□□ -2.08
CUX2O14529 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms